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Name : Desaf_3756 (Desaf_3756) Accession : YP_005053691.1 Strain : Desulfovibrio africanus Walvis Bay Genome accession: NC_016629 Putative virulence/resistance : Virulence Product : Fis family sigma-54 specific transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 4141128 - 4142138 bp Length : 1011 bp Strand : - Note : KEGG: dvl:Dvul_0471 sigma-54 dependent trancsriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core DNA sequence : ATGAATCTCAACCTCGCGGGCATCATCGGCGAGAGCCCGGTGCTCAAGGACGTGTTCAAGGTGCTGGCCAAGGTTGCACC CACGGACTCCACTGTACTGGTCACCGGAGAGTCGGGCACGGGCAAGGAGCTGCTCGTGAGGGCGCTGCACCGCAACAGCC GACGTACCGAGAAGCCCTTTGTACCCATCAACTGCGGGGCCATCCCCAAGGAACTTCTGGAGTCGGAGCTGTTCGGGCAC GAGAAGGGCGCCTTCACGCATGCCATTCGCACTCGGCCGGGCCGTTTCGAGATGGCCGACGGCGGTACTGTTTTCCTGGA TGAGATCGGCGAAATGGATCTTTCCCTGCAGGTCAAGATCCTGCGCGTGCTTCAGGAAAAAGAGTTCGAGCGCGTCGGCG CCACCAAGACCCAGAAGGTCGATGTGCGACTCGTGGCCGCCACCAATCGCGACCTGGAAGGCGAGGTCGCTGCCGGCCGC TTCCGTGAGGATCTGTTCTATCGCCTCAACGTCATACCCATGCATCTGCCGCCCCTGCGCGAAAGGGGCAGGGATGTAAT GATCCTGGCCACGCATTTTCTGGCCAAGTTCTGCGAAATGAAGCAGCGTCCGCCCCTGAGCGTCGCTCCAGACGCGGAGG AATTGCTGTTGCGCTACGAATGGCCCGGAAATGTGCGTGAGCTTGTCAACTTCATGGAGCGTGTGTCCATTCTTTGTGAA AGTGACATACTTCGTCCCGCGGACTTGCCCGAGAAGATGTGGCGGAGCGCTGGAATGGACCGGCCTGAGCCTGTCCGTTC CGAATCCCGCGTTGGGTTCGATTGGCCTACCCTCGAAGATATGCGGAATAAGTCAATGGATCTCAAGGACTTCCTTGATT CCATCGAGGATCGGCTGCTTATGGAGGCCCTGACCAGGGCCGAGGGTGTCAAGAATCAGGCTGCGGAGATTCTCGGCATC AAGCGCACCACGCTCATCGAAAAGCTCAAAAAAAAGAAGCTGGCCAACTAA Protein sequence : MNLNLAGIIGESPVLKDVFKVLAKVAPTDSTVLVTGESGTGKELLVRALHRNSRRTEKPFVPINCGAIPKELLESELFGH EKGAFTHAIRTRPGRFEMADGGTVFLDEIGEMDLSLQVKILRVLQEKEFERVGATKTQKVDVRLVAATNRDLEGEVAAGR FREDLFYRLNVIPMHLPPLRERGRDVMILATHFLAKFCEMKQRPPLSVAPDAEELLLRYEWPGNVRELVNFMERVSILCE SDILRPADLPEKMWRSAGMDRPEPVRSESRVGFDWPTLEDMRNKSMDLKDFLDSIEDRLLMEALTRAEGVKNQAAEILGI KRTTLIEKLKKKKLAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAD24684.1 | sigma-54-dependent enhancer-binding protein HrpS | Virulence | Hrp PAI | Protein | 8e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desaf_3756 | YP_005053691.1 | Fis family sigma-54 specific transcriptional regulator | BAC0467 | Protein | 6e-66 | 45 |
