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Name : Desaf_3450 (Desaf_3450) Accession : YP_005053395.1 Strain : Desulfovibrio africanus Walvis Bay Genome accession: NC_016629 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : - COG ID : - EC number : - Position : 3801760 - 3804822 bp Length : 3063 bp Strand : + Note : TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: bcj:BCAL0420 type I restricti DNA sequence : ATGACCAGAGCTTCATTTGCAGAAGCTGATATCGAAGACGCTGCTTGCGCCATCTTCGAACAGCTAGGCTACAGTATCCG GAGTGGAAAGGAGGTAGATAGCGATGTTGAGCGAGAGCATACTGCCGCAATATTCCTGCGACAGCGAATAGATGATGCTG CTCAACACCTTAGCCCGCAAATTACTGCATGGGCACGGCAGCAAGCGCTGAAGCACTTGCAGAAGCCGGAATATTCAACT CTGGCTCAAAACAACCGCTGGTTCCACACACTTCTCACTGAGGGCGTTGAGGTAGAGTACCGCGATCCCGCGAGCGGCGA GACCCGTGGAGACAGGGCTCGGCTAATCGATTTCAACCACCCCCGCCAGAATGACCTTTTAGTAGTGCGGCAGCTGGCCG TCACTGGACTTTCCGGTAAATTAATCCGCCCCGATCTAACGGTGTTCCTCAATGGTCTGCCGATCGCGGTGATCGAGCTA AAGGACCCAACTAATACCGGCGCAGATCTTAATATGGCCATTGGTCAGCTCAGGGACAAAATGCAGATCGCGCCCGATCT TTTTGTGCCCAACCTGCTGCTTGTCGTTTCTGATGGCCTACTAACCCGTGTCGGATCCATCACTAGCGGGATTAGCCGCT TCACCCCCTGGCGTTCGGCCGAGGGCGGAAAACCAACCTTGGAAGCCTTAATTCACGAGCTGTTCGAACCTTCGATGCTT CTGGACTACCTTCGGACTTGCATTACCTTCGAGGAGGATGAACGCGGAGGGATCGCTAAGAAAATTGCGGGCTATCACCA GTTCCGTGCTGTGCGCAATACTCGCGCCAGCGTGCTAGCGCATCTCAAGTCCCCTATTGGTAAAGGCGACGGACGCGGCG GTGTGGTCTGGCACACGCAGGGCTCGGGCAAGTCACTGACTATGCTGATGCTCGCGGGTGCCTTGGTGCGTGAGCCTGTA ATGGCGAACCCGACGATCGTCATGGTCACTGACCGAAACGATCTCGACGACCAACTCTTCGGCACCTTCGCCGCCGGGCG CGCGCTGCTGCGGCAGGAGCCGATCCAGGCCGAGAGCCGCGAGCACCTTAAGGAACTGCTCGACCGTGCCGCAGGTGGGG TGGTGTTCACCACTATCCACAAGTTCACCGATGCGCACGGTGTAATCTCCGAGCGGGCAAACGTTGTGGTCATGGCAGAC GAGGCGCACCGCAGCCAGTACGGACTCATTGAGGGAGGTGCGCGCTGGATGCGCGAGGCGTTGCCGAACGCAACATTCGT TGGCTTCACCGGCACTCCGCTCGAACGGGATGACAAGAATACTATTCACGTCTTCGGCGAGTATTCGGATGTGTACGATC TCCGCCAGGCGGTGGAAGACGGGGCGACCAAGCCGCTCTATTACGAATCTCGTATTGTGAAGCTGACGGTGGATGGTGCT AGGGCGGCCGCAGCTGAAGCGGAACTGGAGCAGGCAGTAAAGGCCGATGCCTCCGGTGAGGAGGTCGCGGATCAGATCCG CATTCCATTGGAGGCGCTGGTCGGCGCTCAAGAGCGGGTCGCTCGTTTGGCCGCATTCATTGTCGAGCATTGGGAAAAGC GCCGCGCTGCGATGGAAGGCAAGGCAATGATCGTCACTATGAGTCGCGATATTGCCGCGCGACTGTACGAGGGGATCAAG GCTTTTCGACCGGATTGGCACGACCCCGACGACGAGCGCGGGGTGATGAAGGTTATCATCACCGAGCGCGGCAACGATGC TGAGCCGTTGCGCAGTCATGTGCGCCCCAAGGCCGCGCGCAAGCGGCTAGCAGAGCGGTTCAAGAGTCCGGATGACGATT TTCGTTTAGTGATCGTGTGTAACATGTGGCTGACGGGTTTTGATTGCCCACCCGCGCATACCATGTACTTGGATAAGCCG CTGGCCAGCCATAACCTGATGCAAGCCATTGCCCGCGTGAATCGAGTCTATGGCGACAAGCCTGGTGGGTTAATCGTTGA CCTGCTCGGCCTAGCGGATCAGTTGGCGGATGCGCTTGCCACATACACCCAAGCTGGTGGCACCGGTGAGGCGGTAAAGC AGGTCCAGGATGAAGCCGTGCCGGCCATGCAAACGGCATTCGAGAAGCTGCGTGCGTTCTTTCATGGATGCGCTTATGAG GCCGCACTCGATACCGAGCCGAAGGAAGTGTTGCCAATCTATCTCGCGGCCATCGATCATGTCTTTGCACAACAGGATGG CTGGAAGCGCCTGCGCGCGCTGGTGAAGGAATTGTCTGCGGCTTTTGCGCTGGCGGTACCACGTCCAGAAACTGAGAAGG TAGTCGATCATCTGGCGTTCTTCCAACGCGTGACCGCCATGATTCGTAAGAAACTAACGGATGAATCCGGCAGTGCGATG AAGGCACATCAACGCGACGTCGACGCCGCCGTGCGGCAGATCATCGGCGGAGCGGTGGAAGCAGATCAAGTTATAGATCT GTTCGCGGCAGCGGGGCTCGACGAAGCGCGCCTCGACATCCTGAGTGACGAGTTCCTGCAACGGGTCGCCGCGCTGGAGC AGAAGAACTTGGCTTTGGAAACACTGCGCAAGTTGCTGACAGACCAGATTCGCATTACCGAGCGGATGAATATTGTGCAG AGCAAAAAATTCCGTGAAGCTCTCGAAGATGCCATGCTGCGGTATACGAACAAGGCGATTACCACGGCCGAGATGATCTC ACGCCTGCTAGATTTGGCCAAGGACCTACGCAATGCTCAAAGGCGAGGCGAAGACCAGGGACTAAGCCGTGAGGAGGCCG CATTCTACGATGCCCTCGCGGAAAATGGATCAGCAAGGGAAGTCATGAAGAGCGACACCCTCCGACTCATGGCTCGGGAA CTGACGGAGATGATAAAGAAGATGCCCAAGCTCGACTGGACCCAGCGCGAGTCGGTGAGAGCAGGACTGCGGCGCAGTGT TCGTCGTTTGCTCGCCAAGTACGGCTATCCGCCCGATCTGGCGGAAGACGCCACGCAACTCGTACTACGGCAGGCCGAAT TGTCGACGACGAATGGGGTGTAG Protein sequence : MTRASFAEADIEDAACAIFEQLGYSIRSGKEVDSDVEREHTAAIFLRQRIDDAAQHLSPQITAWARQQALKHLQKPEYST LAQNNRWFHTLLTEGVEVEYRDPASGETRGDRARLIDFNHPRQNDLLVVRQLAVTGLSGKLIRPDLTVFLNGLPIAVIEL KDPTNTGADLNMAIGQLRDKMQIAPDLFVPNLLLVVSDGLLTRVGSITSGISRFTPWRSAEGGKPTLEALIHELFEPSML LDYLRTCITFEEDERGGIAKKIAGYHQFRAVRNTRASVLAHLKSPIGKGDGRGGVVWHTQGSGKSLTMLMLAGALVREPV MANPTIVMVTDRNDLDDQLFGTFAAGRALLRQEPIQAESREHLKELLDRAAGGVVFTTIHKFTDAHGVISERANVVVMAD EAHRSQYGLIEGGARWMREALPNATFVGFTGTPLERDDKNTIHVFGEYSDVYDLRQAVEDGATKPLYYESRIVKLTVDGA RAAAAEAELEQAVKADASGEEVADQIRIPLEALVGAQERVARLAAFIVEHWEKRRAAMEGKAMIVTMSRDIAARLYEGIK AFRPDWHDPDDERGVMKVIITERGNDAEPLRSHVRPKAARKRLAERFKSPDDDFRLVIVCNMWLTGFDCPPAHTMYLDKP LASHNLMQAIARVNRVYGDKPGGLIVDLLGLADQLADALATYTQAGGTGEAVKQVQDEAVPAMQTAFEKLRAFFHGCAYE AALDTEPKEVLPIYLAAIDHVFAQQDGWKRLRALVKELSAAFALAVPRPETEKVVDHLAFFQRVTAMIRKKLTDESGSAM KAHQRDVDAAVRQIIGGAVEADQVIDLFAAAGLDEARLDILSDEFLQRVAALEQKNLALETLRKLLTDQIRITERMNIVQ SKKFREALEDAMLRYTNKAITTAEMISRLLDLAKDLRNAQRRGEDQGLSREEAAFYDALAENGSAREVMKSDTLRLMARE LTEMIKKMPKLDWTQRESVRAGLRRSVRRLLAKYGYPPDLAEDATQLVLRQAELSTTNGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 44 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 41 |
