|
Name : Desaf_3209 (Desaf_3209) Accession : YP_005053161.1 Strain : Desulfovibrio africanus Walvis Bay Genome accession: NC_016629 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 3540667 - 3542103 bp Length : 1437 bp Strand : + Note : KEGG: drt:Dret_1097 replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal DNA sequence : ATGAACGGGAACAGGCGCGCTTCTTCCCCAGGGGCCGCCGGCTCCCAGCTCACACAGGAAGCTCTTGGGAAAGTTTCCCA GGATATTCTGCGTAAAATCCCCCCCCAGAATCTGGAGGCTGAACAGGCCGTTCTGGGGGGGGTATTTCTGAACAGCTCCG TATTTCCCCAGCTCCTAGATCTGCTGGATGAGGATGACTTCTACTCCCCGGCCCATCAACGGATATACGCTGCTTTTACG GAGCTTTTCCGCAAATCCATTCCCGTCGACCTGCTCACCGTCGCCGATGAGCTGCACAAGAGCGGTCAACTCGACACCAT CGGCGGCCAGCCTTACCTGGCCGAACTGGCCGGAGGCGTCATCTCCGCGGCCAATGCGGTCTACCATGCCGAAATCGTCA AGGAAAAGTCCATTCAACGCCGACTCATCCGCGTTGCCACGGACATCATCGGCGAATGTTTCGAGCCTGGAACCGGCGTC ACCGAATTGCTGGACCATTCGCAGCAGGCTATTTTCCATATTTCCCAAAGCCGCGGCACGCAGCCGTACCGATCCAGCGC CGAACTTGTCACGGAAGTCTTCGACAAGCTTACCGAACGCGCCAACCGCGGCGAACTCATCACGGGTGTCCGCACATTTT ATACGAAATTCGATGAGATAACTTCCGGTCTGCAGCCAACAGACCTCATCATCATCGCCGGCCGCCCGAGTATGGGCAAG ACGGCCTTCGCCCTGAACCTGGCCATGAACGCGGCTATTCACGACGAAGTGCCCACAGCCATCTTCTCCCTGGAAATGGG CATGGATCAGCTCATGATGCGCATGCTGTGCATCCATGGCCTGGTCGATCTCAAGAACGTGCGCAACGGCTTCCTGGGCG ACGAGGATTGGGCCAAGCTCACGGACGCGGCCGATGCCTTGTCCCGCGCTCCCATCTTCATCGACGATACTCCGGCCATC ACTGCCATGGAACTCCGCTCCCGCTGCCGCAGGCTCAAGATGGACAAGGGCCTCGGACTGGTCGTGGTGGACTACTTGCA ACTCATGCGCGCCAGCCGGCGCACGGACTCCCGCGAGCAGGAGATCTCCGATATCTCGCGCAACCTGAAGGCCCTGGCCA AGGAACTGCATGTGCCGGTTATCGCTCTGTCGCAGCTGAACAGAAAGGTGGAAGAGCGAACCAACAAGCGGCCCATGCTC TCGGACCTGCGCGAATCCGGGGCCATTGAGCAGGACGCCGACGTGATTTGCTTCATCTACCGTGACGAAGTATACAACGA GGACTCTCCCAAAAAGGGAGTGGCCGAAATCATCGTCGGCAAGCAGCGCAACGGACCTGTGGGCGCTGTGGAGTTGGCCT TCATCGGCAAAAGCACGGCCTTTCGCGACTTGTCCCACCAGCCGGAGCCCTCGCCCTCGGAAGCCTCCAGCTTCTAG Protein sequence : MNGNRRASSPGAAGSQLTQEALGKVSQDILRKIPPQNLEAEQAVLGGVFLNSSVFPQLLDLLDEDDFYSPAHQRIYAAFT ELFRKSIPVDLLTVADELHKSGQLDTIGGQPYLAELAGGVISAANAVYHAEIVKEKSIQRRLIRVATDIIGECFEPGTGV TELLDHSQQAIFHISQSRGTQPYRSSAELVTEVFDKLTERANRGELITGVRTFYTKFDEITSGLQPTDLIIIAGRPSMGK TAFALNLAMNAAIHDEVPTAIFSLEMGMDQLMMRMLCIHGLVDLKNVRNGFLGDEDWAKLTDAADALSRAPIFIDDTPAI TAMELRSRCRRLKMDKGLGLVVVDYLQLMRASRRTDSREQEISDISRNLKALAKELHVPVIALSQLNRKVEERTNKRPML SDLRESGAIEQDADVICFIYRDEVYNEDSPKKGVAEIIVGKQRNGPVGAVELAFIGKSTAFRDLSHQPEPSPSEASSF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-76 | 46 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-65 | 42 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 5e-78 | 42 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-77 | 42 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 8e-75 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-71 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-71 | 42 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-75 | 41 |
