Gene Information

Name : Desaf_3034 (Desaf_3034)
Accession : YP_005052992.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3339546 - 3340514 bp
Length : 969 bp
Strand : +
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; KEGG: tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence :
ATGACCACTTTCGGTAATGATCAGCGGCCGATAATGCCGGCCAATCCTTGGATAGACCGCTATCTGGAGCACCTGCTTGT
CTCCAAGGGCCTGTCCGAGAACAGCTTGACAGCCTATGCCACTGATTTTGAGAGCCTGCTTGAATTCTTGACTGAAAAGG
CTCTGCCCATGGAGCGGGTCACGCCTCAGACTTTGCTCCTATACCTCCTACACTTGCGCCGCAAAGGCCTTGGAAACAGA
TCCATGGCCCGCCATCTGTCAGCTTTGCGCGGCTTCTTTGCCTTCGCTTTGGAGGAAGGCTGGCTGGTTGAAAACCCGGC
CGAGTTGCTAGAAAATCCCAAGCTTCCTCAAACGCTCCCCGAAGTACTCAGCCGCGAGGAAGTCGAGCGAATGCTGGAGC
GGCCCGATACGCGCACCAAACTCGGCTTCCGTGACCGGGCCATGCTCGAACTGTTATATGCTGCGGGCTTGCGTGTATCC
GAGCTTGTGGATCTGCGACCACTCGACTTCGACCCTCAGACTGGCGTGCTGCGTGTTTTTGGCAAGGGCAGCAAGGAACG
CCTTGTACCCTTGCACGACCTGGCACAACGTTTTGTGCTGGCTTATCTTGAAAGTTGGAGAAATAGCTTCAAGCCTTTGG
AAGAGCATATGTTTCTCAACCGCTCGGGCAAGGGTCTGACCAGGCAAGCCATTTGGAAGCTGATCAAACGCTATGCCCTG
GAAGCAGGCATTTTCCGCGAGATATCTCCCCATACAATGCGGCACAGCTTCGCCACGCATCTGCTCGAAGGTGGAGCCGA
CCTGCGCACTGTTCAGATACTCCTTGGCCATGCGGATATCAGCGCTACGGAAATTTACACTCACTTACAAACTTCCCGTC
TCCTGGCCGTGCACCGTGAGCACCACCCTCGCTCTGCTAGAAAATCAGGCCGCGCAGCCGCGGTTCATAATGGATCGGAA
GAAAGCTAA

Protein sequence :
MTTFGNDQRPIMPANPWIDRYLEHLLVSKGLSENSLTAYATDFESLLEFLTEKALPMERVTPQTLLLYLLHLRRKGLGNR
SMARHLSALRGFFAFALEEGWLVENPAELLENPKLPQTLPEVLSREEVERMLERPDTRTKLGFRDRAMLELLYAAGLRVS
ELVDLRPLDFDPQTGVLRVFGKGSKERLVPLHDLAQRFVLAYLESWRNSFKPLEEHMFLNRSGKGLTRQAIWKLIKRYAL
EAGIFREISPHTMRHSFATHLLEGGADLRTVQILLGHADISATEIYTHLQTSRLLAVHREHHPRSARKSGRAAAVHNGSE
ES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-48 51
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-48 51