Gene Information

Name : Desaf_2891 (Desaf_2891)
Accession : YP_005052862.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, LuxR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3191882 - 3192514 bp
Length : 633 bp
Strand : -
Note : KEGG: sat:SYN_01953 response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal

DNA sequence :
ATGATACGAATAATGATAGCTGATGATCACCCCATTGTTCGTGAGGGTTTAAAGCAGATCTTAGCTGGCGCACACGATAT
ACAAGTCATTGCAGAGGCGGACACTGGCTATGATTTGCTTGACAAGCTGCCTAAATTTCAACCTGATACCATTCTTTTGG
ATATCAAGATGCCTGGCATTGGCGGACTTGATGTACTCAAGCAAATTAAGAGTCTTAAGCCGGAACTTCCGGTCCTTATT
CTCAGCATGCATCCCGAAGAGCAGTACGCAATCCGAGTTCTTAAGGCTGGCGCAGCTGGTTATTTGACCAAAAATAGTGC
TCCGGAAAAACTCGTCGATGCCATTCGCAAGGTTAACCAGGGGGGTAAATACATCAGTTCGTCCTTGGCCGAGCGCTTAG
CCTTTGATCTTGACAGTGACTCACATAAAAGCTCGCATGAATTTCTCTCTGATCGCGAGTATCAGGTCCTCTGCATGATC
GCCCAGGGCAAAACTGTTTCTGAAATTGCTGATACGCTTAAGCTAAGCGTAAAGACAATTAGTACCTATAGAGCTAGAAT
CCTTGAAAAAATGAAGATGAAGAACAATGCTGAATTGACGTATTACGCAATCCAGAATGGATTAGTAGAGTAG

Protein sequence :
MIRIMIADDHPIVREGLKQILAGAHDIQVIAEADTGYDLLDKLPKFQPDTILLDIKMPGIGGLDVLKQIKSLKPELPVLI
LSMHPEEQYAIRVLKAGAAGYLTKNSAPEKLVDAIRKVNQGGKYISSSLAERLAFDLDSDSHKSSHEFLSDREYQVLCMI
AQGKTVSEIADTLKLSVKTISTYRARILEKMKMKNNAELTYYAIQNGLVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpY AAD24683.1 response regulator HrpY Virulence Hrp PAI Protein 2e-37 45
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-33 42
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaf_2891 YP_005052862.1 two component transcriptional regulator, LuxR family VFG1889 Protein 2e-39 42