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Name : Desaf_2885 (Desaf_2885) Accession : YP_005052856.1 Strain : Desulfovibrio africanus Walvis Bay Genome accession: NC_016629 Putative virulence/resistance : Virulence Product : two component, sigma54 specific, transcriptional regulator, Fis family Function : - COG functional category : - COG ID : - EC number : - Position : 3184767 - 3186101 bp Length : 1335 bp Strand : - Note : KEGG: dde:Dde_3536 two component Fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, r DNA sequence : TTGAAGAATCTTTATAATGTGCTGGTAGTGGACGACGAGGAGTCGATCCTCAAGTTGTTCAAGAAAGAGCTCAGCAACAG CGAGCGGAACATACACACGACCATGAGCGGCAACCAGGCCCGCGCTCTGCTGCAAAAAAACCAGTACGACGTTATTCTCC TGGACATCCGCCTACCCGACGCGGACGGTATCGAACTTTTGATGGAGTGGAAGCAGCGCTTCCCGGATGTCGAGATCATC ATGATCACCGGCCACGGCAATATCGACACAGCCGTGGAAGCCATGAAGATCGGAGCATACGACTATGTCACCAAGCCCTT CCATCTGGACAAGATCGAGTTACTCATCGAGCGCGCCTACCAGAGGGCTTGTCTGCAGCGGGAGAACCGCGGGTTCCGCC ACTCGCAGTCGTCGACCAGGCTGCCACAACTGGTGGGCCGGTCCGCCGGCATCGAGCAGGTGAGATTCCTCATTCGCAAG GTAGCGCCGACTGAAGTGCCTGTGCTGATCACCGGCGAATCAGGCGTGGGCAAGGACGTCGTCGCACGCACGATTCATGC GCTGAGCCCGCGAGCGGAGAAGCCGCTCATCGTGAAGAACTGCGCCACGCTGGAAAAAACCTTGGCTCGCAGTGAACTTT TCGGCCACTTGCGGGGTTCGTTCACGGGTGCGACCGAGAACCGGGATGGGCTCATGACCTTCGCGCACTCCGGTACGCTG TTCCTTGACGAAATCGGCGAACTGCCCCTTGAGGTTCAGGCTTCCCTGCTGCGGGTCCTGGAGAGCAAGGCCTACCGGCG CGTGGGTGAAAAGGAGGAGCGCAAGACTGACATACGCCTGATATGCGCCACTAACCGCAACTTGGCCAAGGAAGTCGAGG CCGGCCGTTTCCACGACGCCTTGTTCCATAGAATCAACGTGTTCAGCTTCAAGGTTCCTGCCTTGAGGGAGCGCGCGGAG GACATTCCGCTGCTGGTGGAATACTTCCTGGGCAGCCTCGGCAGGGAAAAGCGGTGCAGCATCACGGATCGGGCCCTGGA ATGCCTCATGCGCTATGACTGGCCGGGTAATATCAGGGAACTCAAGAACGTCATCGAGCGTAGCATCATCTTGTCCGATA ATGGTGTCATAATGGATCAGGCGCTGCCTCCCGAGATGATCGAGGAAGCTGATTCTTCGTCCTCCGAGCGGGGTCTTTCC CTTGACAGCATGGAGCGAGACCATATTTCTAAAGTACTGGCGCTCCATGAAGGCAACAGGCAAAAAACAGCTGAAGTTCT CGGCATCGGTCGCAAGACCCTGTACCGTAAAATTGAGAAATACAAGATCCAGTAG Protein sequence : MKNLYNVLVVDDEESILKLFKKELSNSERNIHTTMSGNQARALLQKNQYDVILLDIRLPDADGIELLMEWKQRFPDVEII MITGHGNIDTAVEAMKIGAYDYVTKPFHLDKIELLIERAYQRACLQRENRGFRHSQSSTRLPQLVGRSAGIEQVRFLIRK VAPTEVPVLITGESGVGKDVVARTIHALSPRAEKPLIVKNCATLEKTLARSELFGHLRGSFTGATENRDGLMTFAHSGTL FLDEIGELPLEVQASLLRVLESKAYRRVGEKEERKTDIRLICATNRNLAKEVEAGRFHDALFHRINVFSFKVPALRERAE DIPLLVEYFLGSLGREKRCSITDRALECLMRYDWPGNIRELKNVIERSIILSDNGVIMDQALPPEMIEEADSSSSERGLS LDSMERDHISKVLALHEGNRQKTAEVLGIGRKTLYRKIEKYKIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 2e-66 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 2e-66 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desaf_2885 | YP_005052856.1 | two component, sigma54 specific, transcriptional regulator, Fis family | BAC0089 | Protein | 5e-76 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desaf_2885 | YP_005052856.1 | two component, sigma54 specific, transcriptional regulator, Fis family | VFG1214 | Protein | 5e-67 | 42 |
