Name : Desaf_2754 (Desaf_2754) Accession : YP_005052728.1 Strain : Desulfovibrio africanus Walvis Bay Genome accession: NC_016629 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 3039906 - 3041477 bp Length : 1572 bp Strand : + Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: dvu:DVU2376 lysyl-tRNA synthetase DNA sequence : TTGAGCAATAAGAACCAACCAATTAAGTTGAAGATCAAGTCGGGGAACGTTGACAAGTTTCAGCCGTTCCTGCAGGCCAT GGCCGCCAAGGGTGAACTCAACGAGGTTCTCAAGAGCCGTGTCGAGAAAGCCGTGCTGCTCATGGATGAAGGCACGCAAC TCTATCCCAACGGCTTTATCAAGACCGACGACCTTGAGGCTATCTCCACGGAATTTGCAGACACGCCGCCCGAGGCCATG GAGAGTCTGGAGCGCGAGTTCACCGTGGCCGGTCGCATCGTGGCCATGCGCTCCTTCGGCAAAGCCGCCTTTTTTCACCT TCAGGATCCCACGGGCCGCTTGCAGGTTTTTGCCTCGCGCGATGATCTGGGGGAGGATGCCTATCGCGTATTCAAGAAGC TGGACATGGGCGATCTCGTCGGTGTCCGTGGCACGCTTTTCCACACCAAGACTGGCGAGCTAACCCTTAAGTCCTCGCAG ATCACGCTACTGACCAAGTCCCTGCGCCCGCTGCCCGACAAGTGGCACGGACTCAAGGACGTGGAGATGCGCTACCGCCA GCGCTATGTTGATCTCATTGTCACGCCCAGAACGCGGGAGATATTCCTCAAGCGTACCCAGGTCGTGCGTGAGATGCGCA ATTTCCTGGACCGGGAGGGCTTCATGGAGGTGGAAACACCCATGATGCAGCCCATCCCCGGCGGAGCGACGGCCAAGCCC TTTGAAACGCATCATAACGCGCTGGACATGAAGCTCTACATGCGCATTGCGCCCGAGCTTTATCTCAAGCGCTTGCTGGT GGGCGGCTTCGAGAAGGTTTACGAGGTCAATCGCAATTTTCGCAACGAAGGCATCTCCACCCAGCACAATCCTGAATTCA CCATGTGCGAGTTCTACTGGGCATACGCGACCTTCGAGGATCTCATGGATCTCACGGAGCGCATGTTCGCCCACATCGCC CAGCAGGTGACCGGAAACACCGTAGTGGAGTACCAGGGGCAGCAGATCGACCTGACGCCCGGCAAGTGGGCCCGAGTACC CTTTCTGGAGTCCTTGCGCACCATAGGCGGGTTGTCGCCCGAAGTGTACATGGATATGGCCAAGGCCAAGGCCCTGGTAC GCGAGCGCGGGGAGAAGGTCTTGGAGAGCGACAAGCTTGGCAAGGTGCAGGCCATGCTTTTCGACATGTTCGTGGAGCCG AAGCTCGTGCAGCCGCATTTCATATACCATTATCCCACGGATATTTCGCCCCTGTCGCGGCGCAACGACCAGGACCCGAC CATCACCGACCGTTTCGAGCTGTTCATGTCCGGACGGGAGATGGCCAACGCCTTCTCGGAACTCAATGACCCCGTGGATC AGCGCCTGCGCTTCATGGAGCAGGTCCAGGAAAAGGAAGCCGGCGACGAGGAGGCCCACTACATGGACGAAGATTACGTT CGAGCCTTGGAGTACGGCATGCCGCCGGCTGCAGGGCAGGGCATCGGCATTGACCGCCTGGTTATGCTGCTTACCGATTC GCCATCCATTCGCGAGGTCATCCTGTTCCCGCTCCTGCGCCCGGAAGCATAA Protein sequence : MSNKNQPIKLKIKSGNVDKFQPFLQAMAAKGELNEVLKSRVEKAVLLMDEGTQLYPNGFIKTDDLEAISTEFADTPPEAM ESLEREFTVAGRIVAMRSFGKAAFFHLQDPTGRLQVFASRDDLGEDAYRVFKKLDMGDLVGVRGTLFHTKTGELTLKSSQ ITLLTKSLRPLPDKWHGLKDVEMRYRQRYVDLIVTPRTREIFLKRTQVVREMRNFLDREGFMEVETPMMQPIPGGATAKP FETHHNALDMKLYMRIAPELYLKRLLVGGFEKVYEVNRNFRNEGISTQHNPEFTMCEFYWAYATFEDLMDLTERMFAHIA QQVTGNTVVEYQGQQIDLTPGKWARVPFLESLRTIGGLSPEVYMDMAKAKALVRERGEKVLESDKLGKVQAMLFDMFVEP KLVQPHFIYHYPTDISPLSRRNDQDPTITDRFELFMSGREMANAFSELNDPVDQRLRFMEQVQEKEAGDEEAHYMDEDYV RALEYGMPPAAGQGIGIDRLVMLLTDSPSIREVILFPLLRPEA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-115 | 50 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Desaf_2754 | YP_005052728.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 1e-115 | 50 |