Gene Information

Name : Desaf_0227 (Desaf_0227)
Accession : YP_005050244.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 249221 - 249769 bp
Length : 549 bp
Strand : -
Note : TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: dvm:DvMF_1450 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW

DNA sequence : 
ATGAGTGAAACCAACGATACTAAAGCACGCTGGTACATCGTGCACACCTACTCGGGATTCGAGCATCGTGTGGAGCAGAC
CATCCGCGAGATGATGCGCACCGGGCAGGAGCAGGGACTCATCAAGGAAGTGGTGGTGCCCACGGAGAAGGTCATTGAGC
TGGTCAAGGGCGAAAAGCGTACGAGTACGCGTAAGTTCTATCCCGGCTATATCATGGTTCAAATGATCATGACGGACTTC
TCTTGGCATCTTGTACAGACCATCCCCAGAGTCACGGGTTTTGTGGGAGGTAAGAACCGACCCACGCCTATGCGCGACAG
CGAAGCCCAGAAAATTTTGACGATGATGGAGCAGCGGCAGGAAAAACCCAGGCCAAAGTTCCACTTCGAACGCGGCGACG
AAGTCAGGGTTATTGACGGCCCTTTCAGCGGCTTCAACGGCTCTGTCGAGGAAGTCAATTACGACAAGGGCAAGCTCAAG
GTCTCGGTATCCATTTTTGGGCGCCAGACCCCCGTTGAGCTCGATTTCGTCCAGGTGAGCAAGAGCTAG

Protein sequence : 
MSETNDTKARWYIVHTYSGFEHRVEQTIREMMRTGQEQGLIKEVVVPTEKVIELVKGEKRTSTRKFYPGYIMVQMIMTDF
SWHLVQTIPRVTGFVGGKNRPTPMRDSEAQKILTMMEQRQEKPRPKFHFERGDEVRVIDGPFSGFNGSVEEVNYDKGKLK
VSVSIFGRQTPVELDFVQVSKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 2e-42 48
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 2e-42 48