Gene Information

Name : Desaf_2241 (Desaf_2241)
Accession : YP_005052226.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Virulence
Product : type VI secretion protein EvpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2485624 - 2487111 bp
Length : 1488 bp
Strand : +
Note : KEGG: dsa:Desal_0419 type VI secretion protein, EvpB/VC_A0108 family; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877

DNA sequence :
ATGGCTGAAGAAGTGCTCAAGCAAGCCAAGCCGGAGGCCTCTACGGCAGGAGGAGAGCCCTCCCTGCTGGACGAGATCGT
CCAGGCCACCAAGGTCAAGCCTTCCGATGAATCGTACTCCGCGACCAGAGTCGGCGTGCAGGCGTTCATCGACGAGCTCC
TCAAGCCCGGCCGGGAAGGCATCCGGGTGACCCAGGCGGTCATCACCGAAATGATTGCGAACATCGACCAGAAGCTGTCG
ACCCAAGTCGACGCCATCCTGCACGACAGCCAGTTCCAGAAGCTCGAATCGGCCTGGCGGGGTCTCAAGTTCCTCGTGGA
GCGCACGGACTTCCGGGAGAACATCAAGATCTCCATGGTCAACCTGAGCAAAGAGGATCTGCTGGCCGACTTCGAGGATG
CGCCGGAGCTGACCAAGTCCGGGCTCTACAAGATGCTTTACACGGCGGAATACGGGCAGTTCGGCGGCCAGCCCTATGGG
GCCATGGTGGCCAACTACGAGTTCGGGCCCGGGCCCAGGGACATCTCGCTGCTGCAGTCCGTGGCCGCGACCTCGGCCAT
GGCCCATGCCCCGTTCATAGCCGCTGCCGGGGAGTCCTTCTTCGGGGTGGATTCCTTCGAGCAGCTCCCGAACCTGAAGG
ACCTGAAGTCGGTCTTCGAAGGGCCGCAGCACGCCAAGTGGCGCGGCTTCAGGGAGTCGGAGGATTCGCGCAACGTGGGC
CTGGTCCTGCCGCGCTTCTTGCTCAGGTTGCCCTACGGCCCGGAGACCATCCCGTCCAAGAACTTCGAATACCGTGAGAA
CGTCTCGGCCGGAGACACGAGCTTTCTGTGGGGCAACGCGGCCTTTGCCTTTGCCTCCTGCCTGACGGACAGCTTCGCCA
AGTACCGCTGGTGCGCGAACGTCATCGGCCCCCAGGGCGGCGGAGCGGTGTACGATCTGCCGGTCTACACCTACGAGGCC
ATGGGCGCGACCCAGGCCAAGATCCCTACCCAGACGCTCATATCCGAGCGCAGGGAGTTCGAGCTGGCCGAGGAGGGCTT
CATAGCCCTGGCCATGCGCAAGGGCAGCGACAATGCGGCCTTTTTCTCGGCCAACTCGTGTCAGAAGCCGAAGTTCTTCG
GCAACACCAAGGAAGGCAAGGAGGCCGAGACGAACTACAAGTTGGGCACACAGCTGCCCTACATGTTCGTCATCAGCAGG
CTGACCCACTACATCAAGGTCCTCCAGCGCGAGAACATAGGCACTTGGAAGCAGCGCACCGACCTGGAGACGGAACTGAA
TAACTGGATCCGCCAGTACGTGGCCGACCAGGAGAGCCCCTCGGCCGGCGTGCGCTCCAGGCGTCCCCTGCGCCGCGCGG
AGATATCGGTCAACGACATCCCGGGCGATCCGGGCTGGTACGGAGTGACGCTCAAGGTCATGCCCCACTTTAAGTACATG
GGCGCGAACTTCGAGCTGTCTCTCGTTGGCAAGCTGGACAAGGAATAG

Protein sequence :
MAEEVLKQAKPEASTAGGEPSLLDEIVQATKVKPSDESYSATRVGVQAFIDELLKPGREGIRVTQAVITEMIANIDQKLS
TQVDAILHDSQFQKLESAWRGLKFLVERTDFRENIKISMVNLSKEDLLADFEDAPELTKSGLYKMLYTAEYGQFGGQPYG
AMVANYEFGPGPRDISLLQSVAATSAMAHAPFIAAAGESFFGVDSFEQLPNLKDLKSVFEGPQHAKWRGFRESEDSRNVG
LVLPRFLLRLPYGPETIPSKNFEYRENVSAGDTSFLWGNAAFAFASCLTDSFAKYRWCANVIGPQGGGAVYDLPVYTYEA
MGATQAKIPTQTLISERREFELAEEGFIALAMRKGSDNAAFFSANSCQKPKFFGNTKEGKEAETNYKLGTQLPYMFVISR
LTHYIKVLQRENIGTWKQRTDLETELNNWIRQYVADQESPSAGVRSRRPLRRAEISVNDIPGDPGWYGVTLKVMPHFKYM
GANFELSLVGKLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 7e-151 60
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 9e-151 60
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 8e-150 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaf_2241 YP_005052226.1 type VI secretion protein EvpB VFG2475 Protein 2e-176 68
Desaf_2241 YP_005052226.1 type VI secretion protein EvpB VFG2093 Protein 2e-164 65