Gene Information

Name : Desaf_2240 (Desaf_2240)
Accession : YP_005052225.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2485130 - 2485612 bp
Length : 483 bp
Strand : +
Note : KEGG: dsa:Desal_0418 type VI secretion protein, VC_A0107 family; TIGRFAM: Uncharacterized conserved protein UCP028301; PFAM: Uncharacterized conserved protein UCP028301

DNA sequence : 
ATGAAAGACGGTTCCGTGGCCCCAAAAGAGCGGGTGAACATTACCTACAAGCCCGCCACGGGCAGTGCGAAGGAAGAGGT
TGAGCTTCCCCTGAAGCTTTTGGTCATGGGCGACTTCACTCAGAGCCAGGACGACCGCCCGGTCGACCAGCGCGAGCCCG
TGAACGTGGGCAAGGAAAATTTTCAGGAGGTCCTCAAGGCGCAGAACCTGGGACTCAAGCTTACGGTCCCGAACCGCCTC
GCCGACAAGGAGGGCGGACAGCTGACCTTGGACCTCAAGTTCCAGAGCCTCAAGGATTTTGATCCGGACAGCATTGTCAA
GAACGTGCCGGAACTGGCCAAGCTGGTCGAACTCAGGGATGCGCTGTTGGCCCTGAAGGGACCCTTGGGCAACGTTCCCG
AGTTCCGCAAGAAGATTCAGGAGCTGGTTTCCGATCCAGGAGCGCGCGAGCGCCTGCTCAAGGAACTGGGCCTCGAAGGA
TAA

Protein sequence : 
MKDGSVAPKERVNITYKPATGSAKEEVELPLKLLVMGDFTQSQDDRPVDQREPVNVGKENFQEVLKAQNLGLKLTVPNRL
ADKEGGQLTLDLKFQSLKDFDPDSIVKNVPELAKLVELRDALLALKGPLGNVPEFRKKIQELVSDPGARERLLKELGLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 7e-27 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaf_2240 YP_005052225.1 type VI secretion protein VFG2474 Protein 9e-34 58
Desaf_2240 YP_005052225.1 type VI secretion protein VFG2092 Protein 3e-33 54