Gene Information

Name : Desaf_2175 (Desaf_2175)
Accession : YP_005052162.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2417618 - 2419750 bp
Length : 2133 bp
Strand : -
Note : PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; KEGG: dma:DMR_20570 transcription accessory protein

DNA sequence :
ATGAGCCAGAAGCATATCGAACGCGTTGCGGCCGAATTCGGCCTCAAGCCGTCGCAAATACAGGCCGTGGCCGAACTCGT
TGACGGCGGGGCCACGGTGCCCTTCATCGCCCGTTACCGCAAGGAGGCCACTGGTTCCCTGGACGAGGTGGCGGTCACGG
CCATTCGCGACCGTCTGGAGGCCCTGGCCGAACTAGACAAGCGCCGCGAAGCCATCTTGTCCTCGCTGGAAGAGCGCGGG
CTGCTGACCGACGAACTGAAATCCGCCGTCGTCACCGCGCCCAGTCTGGCCGAGCTGGAGGACATCTATCTGCCCTACAG
GCCCAAACGGCGCACGCGGGCCATGATCGCCATGGAAAAGGGGCTGGAGCCGCTAGCCCTGGCCATCATGGAGCAGGGCA
ACATCGTCCCGGCCCGGGAAGCCGAGGCTTACGTGAACGCGGACAAGGGCATCGGCAGCGTGGACGAGGCCCTGGCAGGC
GCGCGAGACATCATCGCCGAGCGCGTGAGCGAACACGCCGTGGCCCGCGCGGACATGCGCAGGCTGTTTGCCGAGCGCGG
CCTGATCCATTCCCGACTGGCCAGGGGTAAGGATGAAACCGAGGCGGCCAAATTCCGGGACTATCTCGACTGGGAGGAAA
AGGCCGCCCCTGCGGCGGGCCATCGCATCCTGGCCATGCTGCGCGGCGAGCGCGAAGGCTTTCTGTCCGTATCCATCCGG
CCGCCCGAGGACATGGCCCTGTGGTTCCTGAACAAGCGTTTCGTGAAGGGCCGCGGCCCGTGCCAGGAGCAGGTAGTGCA
GGCCATTGAGGACGGCTACAAGCGCCTGCTGGCGCCGTCCATGGAAAACGAGATGCGCGCTGAACTCAAGAAACGCGCCG
ACGCCGAGGCCATCGCCGTATTCGCCGCCAATCTGCGCGAGTTGCTGTTGGCCTCGCCGCTTGGGCAGAAGCGCATCATG
GCTCTGGACCCCGGCTTCCGCACCGGGGCCAAGCTCGCCTGCCTCGACGCACAAGGCCGGCTGCTGCACCACGAAACCAT
CTTTCCCACGGGCTCGGAAAAGCAGAGTCGAGAGGCCGGGACGCGCGTGCGCGAGCTGACCGCGCGCTTCGCCATCGAGG
CCGTGGCCGTAGGCAACGGCACGGCCGGCCGCGAAACAGAGGCCTTTGTGCGCGGGCTCGCACTGCCCGGCGTGGCCGTG
GTCATGGTCAACGAGTCCGGGGCCTCGGTCTACTCGGCCTCCGAGATCGCGCGCGAGGAGTTCCCGGACCTGGACCTGAC
CGTGCGCGGCGCGGCGTCCATCGGTCGCCGCCTAATTGACCCGCTGGCCGAACTGGTCAAAATCGAGCCCAAGGCCATCG
GCGTGGGCCAGTACCAGCACGACGTGGATCAGGCCGACCTCAAGCGCGCCCTGGACGACACCGTGGTGAGTTGCGTCAAC
GCCGTGGGCGTGGAGTTGAACACGGCCAGCCCGGCGCTGCTGTCCCACGTCTCGGGCCTGGGACCGACCCTGGCCAAGAA
CATAGCGGCCTGGCGCGACGAGAACGGCCCGTTCGGCGCGCGCCGCGACCTGCTCAAGGTCAAGCGCCTGGGCCCCAAGG
CCTTCGAACAGGCCGCCGGATTCCTGCGCATCCGCGAAGCCATGAACCCGCTGGACGCAAGCGCCGTGCACCCCGAACGC
TACGCCCTGGTGGAGCGCATGGCCAAGGACCTGGGCGCGAGCGTTGCCGAACTCATGCGCGATGCCGGCCTGCGGGAGCG
TGTCGATCTGAAAAAGTATGTCTCGGCCGACGTGGGCCTGCCTACCCTGACGGACATCATGGCCGAACTGGCCCGGCCTG
GGCGCGACCCAAGGCCGACATTCGAGGCCTTCTCCTTTGCCGAGGGCGTGAACGCCATAGGCGACCTGGAGCCGGGCATG
GTCCTGCCGGGCGTGGTGACCAACGTGACCCGCTTCGGCGCGTTCATCGACGTGGGCGTGCACCAGGACGGCTTGGCCCA
CGTGAGCCAGATCGCCGACCGCTACGTGAAGGACCCGGCCGAAGTCGTGCGTGTGGGACAGAAGGTCACGGCCAGGGTCC
TGGAAGTGGACAAGGAGCGCAAACGCATTTCTCTGTCGCTGAAGAAAGCATAG

Protein sequence :
MSQKHIERVAAEFGLKPSQIQAVAELVDGGATVPFIARYRKEATGSLDEVAVTAIRDRLEALAELDKRREAILSSLEERG
LLTDELKSAVVTAPSLAELEDIYLPYRPKRRTRAMIAMEKGLEPLALAIMEQGNIVPAREAEAYVNADKGIGSVDEALAG
ARDIIAERVSEHAVARADMRRLFAERGLIHSRLARGKDETEAAKFRDYLDWEEKAAPAAGHRILAMLRGEREGFLSVSIR
PPEDMALWFLNKRFVKGRGPCQEQVVQAIEDGYKRLLAPSMENEMRAELKKRADAEAIAVFAANLRELLLASPLGQKRIM
ALDPGFRTGAKLACLDAQGRLLHHETIFPTGSEKQSREAGTRVRELTARFAIEAVAVGNGTAGRETEAFVRGLALPGVAV
VMVNESGASVYSASEIAREEFPDLDLTVRGAASIGRRLIDPLAELVKIEPKAIGVGQYQHDVDQADLKRALDDTVVSCVN
AVGVELNTASPALLSHVSGLGPTLAKNIAAWRDENGPFGARRDLLKVKRLGPKAFEQAAGFLRIREAMNPLDASAVHPER
YALVERMAKDLGASVAELMRDAGLRERVDLKKYVSADVGLPTLTDIMAELARPGRDPRPTFEAFSFAEGVNAIGDLEPGM
VLPGVVTNVTRFGAFIDVGVHQDGLAHVSQIADRYVKDPAEVVRVGQKVTARVLEVDKERKRISLSLKKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 9e-150 47