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Name : Desaf_0199 (Desaf_0199) Accession : YP_005050218.1 Strain : Desulfovibrio africanus Walvis Bay Genome accession: NC_016629 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 215779 - 217455 bp Length : 1677 bp Strand : + Note : TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: sus:Acid_7778 type II secretion system protein E (GspE); SMART: ATPase, AAA+ type, core DNA sequence : ATGTCTAATATCATCGATGCCATGATAGACCGAGGAATGCTGCAACGCGACGAACTGCGCCGCGTTGTGGCCAACAGCCG AACGGGCGAACCGCCCTACAAGGTGGCCATACGCACGGGTCTCGTGTCGGAGGACGACTTTCTCGGCCTGGTGGCCGCGG AACTCGGCATACCCTTCATCAAAACCCTTCCCGAGACGTACGACCCTGAGGCCTTCTCCCGCATTTCGCCGTTGTTCATG CAGGAGCACGCCTTCGTGCCCATGGCCGTGCACGACGGCAAACTATCCATCGTCATCAGCGATCCCTTCGACCATATCGT CATCGATACGCTCAAGAAACTGTTCAGGGTGGGCGATATAGAGCTGGCCATAAGCCGCGAAGAATCCATTCGCGCCTGGA TCCAGGCCCACTACCTGCACGGCGAGCACCGCCAGCAGGACAGTGATGATGAGCAGGCCGCCGAACCAGAGTTCCTTGCC TTCGAGGATGTGGAGCAGCTCAAGGACTTGGCCTCCGAGGCCCCGGTAGTCAAGAAGGTCAACCTCATCCTGACCAAGGC CGTGGAGAGCGCGGCCAGCGACATCCACCTGGAGACCTTTCAGGATCGCATCCAGGTGCGCTTCCGCATCGACGGAATCC TGCAAGATTTCGAGGCCCTGCCTCGTCATCTGCAACAGGCCATCGTCTCGCGCATCAAGATCATGGCCCGCCTGGACATC GCCGAACGCCGCCTGCCCCAGGACGGCAAGATGTTCCTCAAGATCGCCGGCAAATCCATCGACATGCGCGTGTCCTGCCT GCCCACGACCCACGGCGAGTCCGTGGTCATCCGCCTGCTGGACCGCACGTCCATCTCGTTTTCCATGGAGAAACTGGGCT TTCCGGCCCTGCAACTGGAGGCCTTCGACCAGCTCATTCGCCAACCCCACGGCATCGTCCTGGTCACCGGCCCCACGGGC AGCGGCAAAACCACCACACTCTACTCAGCCCTCAACACGCTCAACTCGCCGGATAAAAAAATCATCACCATCGAGGATCC GGTGGAATATGACCTGGACGGCATCAACCAAGTCCAGGCCAATCCGAAAGCCGGATTGACCTTTGCCAGCGGTCTGCGCT CCATAGTGCGCCAGGACCCGGATGTGATCCTCATCGGCGAGATCCGCGACCGGGAAACGGCGGATATCGCCGTGCAGTCG GCCCTCACGGGCCACCTGGTCTTCTCCACCCTGCACACCAACGACGCGGCCGGCGCCGTGACACGGCTGGTGGAAATCGG TGTGGAGGACTACCTGCTGTCCTCGTCCCTATTGGGCATCCTAGCCCAGCGGCTGCTGCGCGTGCTCTGTCCGGCCTGCA AGAAACCCTTTCTGCCCGATGAAGCCTTGGTCCGCAGGTTGGGCATGCCCTGGACGCCCACTCCGGCCGAACCACTGTAC GAGGCCGTGGGCTGCCCCAAGTGCAGCAATACCGGCTATCGCGGCAGGACGGCCATCTTCGAGGTCCTGCCCGTGAGCGA CGAAGTCAAGAGCCTCATCCTGGAGAGCAAGAGCTCCACGGCCATCCGCGACCTGGCCGTGAGCCAGGGCATGCGGCTGC TCCGTGACAGCGGCTGGGAAAAGGTGCGCCAGGGTCTGTCCTCGGCCACGGAAGTCCTGCGCGTGGCGGGAGGCTAA Protein sequence : MSNIIDAMIDRGMLQRDELRRVVANSRTGEPPYKVAIRTGLVSEDDFLGLVAAELGIPFIKTLPETYDPEAFSRISPLFM QEHAFVPMAVHDGKLSIVISDPFDHIVIDTLKKLFRVGDIELAISREESIRAWIQAHYLHGEHRQQDSDDEQAAEPEFLA FEDVEQLKDLASEAPVVKKVNLILTKAVESAASDIHLETFQDRIQVRFRIDGILQDFEALPRHLQQAIVSRIKIMARLDI AERRLPQDGKMFLKIAGKSIDMRVSCLPTTHGESVVIRLLDRTSISFSMEKLGFPALQLEAFDQLIRQPHGIVLVTGPTG SGKTTTLYSALNTLNSPDKKIITIEDPVEYDLDGINQVQANPKAGLTFASGLRSIVRQDPDVILIGEIRDRETADIAVQS ALTGHLVFSTLHTNDAAGAVTRLVEIGVEDYLLSSSLLGILAQRLLRVLCPACKKPFLPDEALVRRLGMPWTPTPAEPLY EAVGCPKCSNTGYRGRTAIFEVLPVSDEVKSLILESKSSTAIRDLAVSQGMRLLRDSGWEKVRQGLSSATEVLRVAGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-92 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-92 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desaf_0199 | YP_005050218.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-103 | 50 |
| Desaf_0199 | YP_005050218.1 | general secretory pathway protein E | VFG2426 | Protein | 3e-83 | 49 |
| Desaf_0199 | YP_005050218.1 | general secretory pathway protein E | VFG1876 | Protein | 3e-91 | 49 |
| Desaf_0199 | YP_005050218.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-93 | 48 |
| Desaf_0199 | YP_005050218.1 | general secretory pathway protein E | VFG1880 | Protein | 6e-85 | 41 |
| Desaf_0199 | YP_005050218.1 | general secretory pathway protein E | VFG0112 | Protein | 1e-81 | 41 |
