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Name : Desaf_1958 (Desaf_1958) Accession : YP_005051946.1 Strain : Desulfovibrio africanus Walvis Bay Genome accession: NC_016629 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2174790 - 2176070 bp Length : 1281 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: dsa:Desal_3376 seryl-tRNA synthetase DNA sequence : ATGCTCGATCTAAAATTTCTGCGGGGCAACATGGACTTGGTGCGTCAGGCCTTGGCCAACCGCAACTCCAGCCTGTCCCT GGACCATTTCGAGGAGCTGGACCGCAAGCGCCGCGAACTGCTGCTGGAATCCGAGACGCTCAAGAGCGAGCGCAACAAGG CCTCGGGCGAAGTGGCCCGGCTTAAGCGCGAGGGTCAGGACGCCCAATCATTGCTGGGCGAATTGTCGGCCAAAAGCGAG CGCATCAAGATACTGGACGATCTTCTGAAGGGAGTGGACGATGAGGTACAGGGCTTCCTGCTGACCATCCCCAACATCCC CCATGCCAGCGTGCCCGTTGGCAAAAGCGAAGAAGACAACCAGGTCGTGCGCACCTGGGGTGAGCCCAAAACTTTCGACT TCACGCCCAAGGAACACTGGGAATTGGGGACGGCCCTGGGCGGCCTCGATTTCGAGCGCGCCGCCAAGCTGGCCGGCAGC CGTTTCGTCGTGCTGCGCGGCTGGGCCGCCCGCCTGGAGCGAGCCCTGGCCGCTTTCATGCTCGACGTGCAGACCTGTGA GCACGGCTACACCGAGATCGTCCCCCCTTACATGGTCAACCGCCAGACCATGACCGGCACGGGCCAGCTGCCCAAGTTCG AGGAGGATCTATTCAAGCTGGAGGGCTGCGATTACTATCTCATCCCCACGGCCGAGGTGCCCCTGACCAACCTGCACGCC GACGAAACCCTGGACGAGGACAAGCTTCCGCTGACCTTCTGCGCCTTCACGCCCTGCTTCCGTTCCGAGGCCGGCTCCTA TGGCAAGGACACCAAGGGCCTCGTCCGCCTGCATCAGTTCCACAAGGTCGAGCTGGTGCGCATCGCCCACCCGGACCGCT CTTATGAAGATCTGGAGCTCATGACCTCCCACGCCGAAACCATCCTCCAGAAGCTCGGCCTGCCCTATCGCGTGCTGGCC CTGTGCACCGGCGACATGGGCTTCTCCGCGACCAAGACCTACGATCTTGAAGTCTGGCTGCCTGGGCAAGGCAAGTACCG CGAGATTTCCAGCTGCTCCAACTGCGAGGACTTCCAGGCCAGACGCGCAGGCATTCGCTGCAAGGAAAAGAGCGCCAAGA AAAGCCGCCTGACGCACACGCTCAACGGCTCCGGGCTGGCCGTGGGCCGGACCATGGTCGCCGTGCTGGAGAACTATCAG CAGGCCGACGGCTCAATTCTGGTGCCCGAAGCGCTGAAATCATACATGGGGGGGCTAGACATCATCCGCCCGGAAGTATA A Protein sequence : MLDLKFLRGNMDLVRQALANRNSSLSLDHFEELDRKRRELLLESETLKSERNKASGEVARLKREGQDAQSLLGELSAKSE RIKILDDLLKGVDDEVQGFLLTIPNIPHASVPVGKSEEDNQVVRTWGEPKTFDFTPKEHWELGTALGGLDFERAAKLAGS RFVVLRGWAARLERALAAFMLDVQTCEHGYTEIVPPYMVNRQTMTGTGQLPKFEEDLFKLEGCDYYLIPTAEVPLTNLHA DETLDEDKLPLTFCAFTPCFRSEAGSYGKDTKGLVRLHQFHKVELVRIAHPDRSYEDLELMTSHAETILQKLGLPYRVLA LCTGDMGFSATKTYDLEVWLPGQGKYREISSCSNCEDFQARRAGIRCKEKSAKKSRLTHTLNGSGLAVGRTMVAVLENYQ QADGSILVPEALKSYMGGLDIIRPEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-112 | 58 |
