Gene Information

Name : Desaf_1670 (Desaf_1670)
Accession : YP_005051665.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Resistance
Product : Phosphonate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1854534 - 1855205 bp
Length : 672 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: dma:DMR_19590 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGCTTTCCGCACGCGACATCTGCAAAAGCTACCGCTCGCAAGGCGTGGAAACGCCCGTGCTGCGCAACGTGAGCCTGGA
CATCGAGCCAGGCGGCTTCGTGGCCATCGTGGGCCGCTCAGGCTCGGGCAAGTCGACTCTGCTGAGTGTCCTGTCCACCC
TGCTGCGACCCGACTCGGGCGCCCTGACTTGGCAGGGCCGGGCCATAGACCACGCCTCCGAGCGCGTTATCAACGCTCTG
CGGCGCAAGGACTTTTCCGTGGTCTTCCAGCAGCATCAGCTCATGCCCTATCTCACGGCCCAGGAAAACGTGCTGCTGCC
ATTCATGCACGGCCTGCGGCCCGTGAAACGCGAGCAGACCGACAGGGCCCGCGAGTGCCTGGCGCGCGTGGGCCTGGCGG
GCAAGGGCGAACGCCTGCCGGGGCAACTCTCGGGCGGCGAGCAGCAACGCGTGGCCATCGCCCGCGCCCTGGCCACGAGC
CCCGCAATGCTCTTTGCCGACGAGCCCACGGGCAGCCTGGACAAGGCCACGGGCCAGGGCATCATGGAGCTGCTGGCCGG
GCTCAACTCCGACGGCCCGGCCGTGGTGCTGGTCACTCATGAGCCGGCCTACGCCAAGCTGGCCCGCACCGTGGCAGTTA
TGGAAGACGGCAGGCTTACGATACAGGCCTAG

Protein sequence : 
MLSARDICKSYRSQGVETPVLRNVSLDIEPGGFVAIVGRSGSGKSTLLSVLSTLLRPDSGALTWQGRAIDHASERVINAL
RRKDFSVVFQQHQLMPYLTAQENVLLPFMHGLRPVKREQTDRARECLARVGLAGKGERLPGQLSGGEQQRVAIARALATS
PAMLFADEPTGSLDKATGQGIMELLAGLNSDGPAVVLVTHEPAYAKLARTVAVMEDGRLTIQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-27 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaf_1670 YP_005051665.1 Phosphonate-transporting ATPase NC_008702.1.4606598. Protein 1e-31 47
Desaf_1670 YP_005051665.1 Phosphonate-transporting ATPase NC_012469.1.7686878. Protein 2e-33 43