Gene Information

Name : Desaf_1238 (Desaf_1238)
Accession : YP_005051236.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1370323 - 1370769 bp
Length : 447 bp
Strand : +
Note : KEGG: dma:DMR_28470 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal

DNA sequence : 
ATGTGTCGGAAAGAAAGCAAGCGTAACAAGGAACTCGGCTTCACGCTTATCGAACTCATGGTGGTCATCGTCATCCTGGG
CATTCTAGCCGGACTCATCGTGCCGCGCATCATGGACCAGCCCGATCAGGCCCGGCAGGTAAAGGCCAAGATGCAGATGG
AGAGCTTGTCCACCGCGCTCAAGCAGTTCCGCCTGGACAACGGCTTCTACCCGAGCACCGAGCAGGGCATGCAGGCGCTG
GTGCAAAAGCCCAGCGTGGGCCGCGACGCGCGCAACTATCCGCGCGGCGGCTATCTGCCCAAGATGCCCAAGGACCCCTG
GGGCTTCGACTACGTGTACATCAGCCCCGGCCAGCACGGCGACTTCGATATCATCTCCCTGGGCGGCGACGGCAAGGAAG
GCGGCGAGGGCGGCGATGCCGACGTCAGAAACTGGGAAATCCAGTAA

Protein sequence : 
MCRKESKRNKELGFTLIELMVVIVILGILAGLIVPRIMDQPDQARQVKAKMQMESLSTALKQFRLDNGFYPSTEQGMQAL
VQKPSVGRDARNYPRGGYLPKMPKDPWGFDYVYISPGQHGDFDIISLGGDGKEGGEGGDADVRNWEIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 7e-21 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-21 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaf_1238 YP_005051236.1 general secretion pathway protein G VFG0180 Protein 2e-19 53
Desaf_1238 YP_005051236.1 general secretion pathway protein G VFG2050 Protein 2e-21 52
Desaf_1238 YP_005051236.1 general secretion pathway protein G VFG1871 Protein 1e-19 47