|
Name : Desaf_0110 (Desaf_0110) Accession : YP_005050129.1 Strain : Desulfovibrio africanus Walvis Bay Genome accession: NC_016629 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : - COG ID : - EC number : - Position : 120390 - 121382 bp Length : 993 bp Strand : - Note : SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: drt:Dret_0322 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core DNA sequence : ATGAACGATCCTATCGCCAAGCGTGACTGGCTGGCCCTGGCCAAGGAAGTCCTGGATATCGAGATCGAGGGGCTGTCGCA GGTCCGGGACGGCCTGGACGAGAGTTTTGCCCTGGCCGTGGAGATGCTGGCGGCCTGCCATGGCCGAGTCATCGTCTCGG GCCTGGGCAAGTCCGGCCTCGTGGGCCGCAAGATCGCGGCCACCATGTCCAGCACGGGCACGGCCGCCGCATTTCTGCAT CCGGTTGAAGGCGCGCACGGCGACCTGGGCATGATCCGTCCCGGCGACGTGGTGCTGGCCTTGTCCAACTCCGGCGAGAC CGACGAGCTCAACGCCATTGTGCCCAGCCTGAAGGCCATGGGCGCACAGGTCGTGGCCATCACCGGCAACCGCGACTCCA CACTGGGACGGCTGGCCGATGTGGTCGTGCAGGCCAAGGTTGCGCGCGAGGCCTGCCCCCTGAATCTGGCTCCCACTGCA AGCACCACGGCAACTCTGGCCGTGGGCGATGCCTTGGCCGTGTGTCTGCTGCAATGCAAGCCCTTTACCGAGGCGGACTT CCGCATGTGCCATCCCGGCGGCGCCCTGGGGCAACGCCTGTCCCGCAAGGTCGGCGACATGATGCACACGCGCAACCTGC CGGTGGTGGGCGCAGGCTCGGACCTGGGCGCGGCAATGGCCGAACTCAACCGTGGCCGGCTGGGCATGGTGGCAGTGGTG GACCGCCAGGGGCGTTTGCAGGGTATTTTCGTGGACGGCGACGTGCGCCGTCTGGCCATGAGCAATGGTCTGGACATGCA TCGTGCCGTGGCCGAAGTAATGGTCAAATCGCCCAAGACTTTGCGCCCTGAAGGCAAGGCAGCCGAAGCCATGGACATCA TGGAAGCACACCAGATCACCGTGCTGCCCGTGGTGGACGACACCGGAGTGCTGCTAGGCATGCTCCACCTGCACGACCTG CTGGGCAAGGGCCGGCTCAGGTTCGCGACTTAG Protein sequence : MNDPIAKRDWLALAKEVLDIEIEGLSQVRDGLDESFALAVEMLAACHGRVIVSGLGKSGLVGRKIAATMSSTGTAAAFLH PVEGAHGDLGMIRPGDVVLALSNSGETDELNAIVPSLKAMGAQVVAITGNRDSTLGRLADVVVQAKVAREACPLNLAPTA STTATLAVGDALAVCLLQCKPFTEADFRMCHPGGALGQRLSRKVGDMMHTRNLPVVGAGSDLGAAMAELNRGRLGMVAVV DRQGRLQGIFVDGDVRRLAMSNGLDMHRAVAEVMVKSPKTLRPEGKAAEAMDIMEAHQITVLPVVDDTGVLLGMLHLHDL LGKGRLRFAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-42 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-42 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 8e-42 | 42 |
