Gene Information

Name : Desaf_1104 (Desaf_1104)
Accession : YP_005051106.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Resistance
Product : Phosphonate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1215063 - 1215842 bp
Length : 780 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: sfu:Sfum_1004 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGGATGTCCGGGCATGGCTTCCTCCCGGCCTGCTTTTCCGCTACGTGTGTGGCATGGAAATGTTTCACGTGAACCATTC
CACCCTGTTCCCGGCTGACAGCATCATCAGCGCGAACAGCCTGACGCGCGTCTACCCTATGGGCGAGTCCGGCGTGGCCG
GGCTGCGCGGGGTGGACCTGCGCGTGCCGGCCGGGGCCATGGTCGTGCTCAAGGGCGTCAGCGGCTCGGGCAAAAGCACT
TTGCTGGCTCTGTTGGCCGGGCTGGACCGGCCAACGTCCGGCTCTCTGCGGGTAGCCGGCGTGGACCTGGTCAATGCTGG
CGAGGCCGAGCTGACCGATTTCCGTCGACGCATCGTGGGCATGGTTTTCCAATCCTTCAATCTCATGCCCACCATGAATG
TGCTGGAGAACGTGCTGCTGCCAGCGCTTTTGGCCGGTCGGGACGAGCGTGCGTCTCGCGGCCGGGCCATGGAGCTGCTG
GATTGGCTGGGCATGGCCCCGCGCGTGGGCCACTCCCCGGCCCAACTCTCGGGCGGCGAGATGCAGCGTACGGCCATCGC
CCGCGCGCTTATCAACGACCCGGCAATCATCCTGGCCGACGAGCCCACGGGCAACCTGGACAGCGAGAGCAGCCATGCCG
TTGTGGCCCTGCTGGCCGAGCTCAACCGCATCATGGGCCGCACGGTCATCGTGGCCACCCACGCCAACCTGGCAGATCCC
TACGCAACTCTGCGCCTGCTTCTGACCGATGGAAGGCTGACGCAGCCAGTGGCGGACTGA

Protein sequence : 
MDVRAWLPPGLLFRYVCGMEMFHVNHSTLFPADSIISANSLTRVYPMGESGVAGLRGVDLRVPAGAMVVLKGVSGSGKST
LLALLAGLDRPTSGSLRVAGVDLVNAGEAELTDFRRRIVGMVFQSFNLMPTMNVLENVLLPALLAGRDERASRGRAMELL
DWLGMAPRVGHSPAQLSGGEMQRTAIARALINDPAIILADEPTGNLDSESSHAVVALLAELNRIMGRTVIVATHANLADP
YATLRLLLTDGRLTQPVAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaf_1104 YP_005051106.1 Phosphonate-transporting ATPase NC_008702.1.4606598. Protein 5e-32 48
Desaf_1104 YP_005051106.1 Phosphonate-transporting ATPase CP001581.1.gene598.p Protein 4e-34 44
Desaf_1104 YP_005051106.1 Phosphonate-transporting ATPase CP001581.1.gene798.p Protein 3e-38 44
Desaf_1104 YP_005051106.1 Phosphonate-transporting ATPase NC_012469.1.7686878. Protein 9e-36 43