Gene Information

Name : vfu_B00837 (vfu_B00837)
Accession : YP_005049368.1
Strain :
Genome accession: NC_016628
Putative virulence/resistance : Virulence
Product : ATP-binding component of citrate-dependent iron(III) transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 872123 - 872890 bp
Length : 768 bp
Strand : -
Note : COG1120

DNA sequence :
ATGCGTTTAACCACTGAAAATCTGATTGTCGGCTACGGCAAAGGGCCGATTGTGAACGGTGTGGATGTCGTCATTCCGGA
AGGAAAAATTACCGCGTTGCTCGGCCCCAACGGCTGTGGCAAATCCACGTTGCTGAAAACCTTGTCACGCATTCTCCATG
CCGAAAGCGGGCAGGTGTTGTGGCAGGGCAAACCGATCGCTCAGGTGCCGTCGCGTTTGTTGGCGCAGCAACTGGCACTG
TTGCCGCAATCGCAAGAGCCGCCGGAAGGGGTGAGTGTGCGCGAGGCAGTGGCGTATGGTCGCAGTCCGTACACTGGATT
CTGGGGCCAGCTGTCTAGCGAGGACAAGCGCATTGTCGAGCAAGCGATGCAGGCGACCGGCGTGGCGGAATTTGCCGAGC
GCGCGGTGTCGGACCTGTCCGGCGGCCAGCGTCAGCGCGTGTGGCTGGCCCTGACCTTGGCGCAAGATACCGATTTTGTG
CTGCTTGACGAACCGACGACTTACCTTGATATCAACCATCAGGTCGAACTGATGAAGCTGATGCGTCTACTCAATCAGCA
GGGCAAAACCATTGTCACGGTGCTGCACGACATCAATCAGGCATGCCGCTACTGCGACCACCTGATCGTGATGCAGCGCG
GGCGCATTGTTGGCGAAGGGGGACCCGACGACGTGATGACGCCGCAACTGCTCGCCAATGTGTTTGAACTGGATGCGGAA
ATTCACCGCGATCCGATTGCCGGCACGCCGATGTGCATTGTTCGCTGA

Protein sequence :
MRLTTENLIVGYGKGPIVNGVDVVIPEGKITALLGPNGCGKSTLLKTLSRILHAESGQVLWQGKPIAQVPSRLLAQQLAL
LPQSQEPPEGVSVREAVAYGRSPYTGFWGQLSSEDKRIVEQAMQATGVAEFAERAVSDLSGGQRQRVWLALTLAQDTDFV
LLDEPTTYLDINHQVELMKLMRLLNQQGKTIVTVLHDINQACRYCDHLIVMQRGRIVGEGGPDDVMTPQLLANVFELDAE
IHRDPIAGTPMCIVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-64 57
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-44 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-44 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 49
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-46 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-47 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-47 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-47 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vfu_B00837 YP_005049368.1 ATP-binding component of citrate-dependent iron(III) transport protein BAC0164 Protein 3e-64 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vfu_B00837 YP_005049368.1 ATP-binding component of citrate-dependent iron(III) transport protein VFG1042 Protein 3e-64 57
vfu_B00837 YP_005049368.1 ATP-binding component of citrate-dependent iron(III) transport protein VFG0925 Protein 2e-49 47