Gene Information

Name : vfu_B00683 (vfu_B00683)
Accession : YP_005049225.1
Strain :
Genome accession: NC_016628
Putative virulence/resistance : Unknown
Product : sigma-54 dependent transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 708558 - 710144 bp
Length : 1587 bp
Strand : +
Note : COG3604

DNA sequence :
ATGCAAGATTTCTCTATTTCAACCTTAGTCGACATGACCATTGGTTTGGCGAGCGGGCTCAATGATGAAGACCGTTTCAA
CCGCCTGCTCGATGCGGTACGAAAAACCATTCAGTGCGATTGCGTGGCGCTGATGTCCCTACAAGGCGACACCTTGGTAC
CACTGGCCATGCAAGGGCTCACGCGGGATACGCTTGGCCGTCGCTTTTTGATCCACGAACACCCGCGCCTTGATCAAATT
TGCGCCTCCACCACGCCGGTGCGCTTTGACGCAGACAGCCCACTGCCCGACCCGTTTGATGGCCTGTTGATGGATCACGA
TGATGACCTGCCGATGCACTCGTGTATGGGATTACCCTTGATCTTCGGTGACAAGTTGCTGGGTGTGCTCACGCTCGATA
GCCTCATGCCCAATGCGTTTGAGCACATTCCGTTGCGCAGCTTAGAAGTGCTCGCGGCCATCGCGGCCTCAACCCTCAAA
ATGGCGCTGACGTTTTCTCAGTTAGAAACGCAAGCCAAGCAAACGCAGCAACGCTTGGAAGAGCTCAATGAAGAGGCATG
GGTGCGAGATGGCGGCGAAATCATTGGCTCCAGTGAAGCCATGCAAGTGATGAAAGCAGACTTGGAAGTGGTAGCACCGT
CGAATTTTAATATTCTGATCCACGGTGAAACAGGCGTGGGGAAAGAGCTGGTTGCCCGCACGATTCATCATCTCTCTCCC
CGCAAACGTCAGCCGCTGATTTACGTCAACTGCGCCGCAATTCCCGAGAATCTGGTGGAAAGCGAACTGTTTGGCCACGT
GAAAGGCGCCTTTACCGGCGCGGATCGCAATCGCTTGGGTAAGTTTGCCTTAGCCGATGGCGGCACGCTGTTTATGGATG
AAATTGGCGAACTGCCACTGGCGGCGCAAAGCAAAATTTTGCGGGCGCTGCAAAACAACGAAATTCAACCTGTGGGTCAG
GATCAGGTCCAAACCATCAATGTGCGAATTCTGGCTGCCACCAACCGCGATTTAAAACAAGAAGTCGACGCCGGACGCTT
TCGCGCCGATCTGTATCACCGCCTCAGTGTCTACCCGATTCACGTGCCGCCTCTGCGCGAGCGCAATGGCGACGTGACGT
TGCTGGCGGGCTACTTTCTGGAAGTCGCACGGCGCAAACTGGGGATCGTACAACTGAAGATTCATCAGCAAGCGTTGAGT
CATCTGATTTACTACACGTGGCCGGGCAACGTGCGAGAGTTGGAACATGTCATCAATCGCGCTGCTTTGAAAGCACGTGC
CAAGCACCCGATGCAAACGCTCATCACCGTGAGCGCCGAAGACATTGGCGTGTTGGAAGGTGATGCACACACCCCCGCCA
AAGCGGTGCCATCTGCCCAAACTGAGCCGGTGATTGATTTGTCGAAAGGGTTACGTGACGCCACCGATGACTTTCAGCGC
CGCCTTGTCAGTGAAGCGCTGACGCAAGCCGAATTCAACTGGGCGAAAGCCGGACGATTGCTGCAAGTCGACCGAGCCAA
TTTAACACGCTTGGCAAAACGCTTGGGCATCAACGTCACCAAAACCCACAAGATTGAACCCCGTTAA

Protein sequence :
MQDFSISTLVDMTIGLASGLNDEDRFNRLLDAVRKTIQCDCVALMSLQGDTLVPLAMQGLTRDTLGRRFLIHEHPRLDQI
CASTTPVRFDADSPLPDPFDGLLMDHDDDLPMHSCMGLPLIFGDKLLGVLTLDSLMPNAFEHIPLRSLEVLAAIAASTLK
MALTFSQLETQAKQTQQRLEELNEEAWVRDGGEIIGSSEAMQVMKADLEVVAPSNFNILIHGETGVGKELVARTIHHLSP
RKRQPLIYVNCAAIPENLVESELFGHVKGAFTGADRNRLGKFALADGGTLFMDEIGELPLAAQSKILRALQNNEIQPVGQ
DQVQTINVRILAATNRDLKQEVDAGRFRADLYHRLSVYPIHVPPLRERNGDVTLLAGYFLEVARRKLGIVQLKIHQQALS
HLIYYTWPGNVRELEHVINRAALKARAKHPMQTLITVSAEDIGVLEGDAHTPAKAVPSAQTEPVIDLSKGLRDATDDFQR
RLVSEALTQAEFNWAKAGRLLQVDRANLTRLAKRLGINVTKTHKIEPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
norR ABD94719.1 putative nitric oxide reductase transcriptional regulator Not tested ExoU island B Protein 6e-100 46