Gene Information

Name : vfu_B01347 (vfu_B01347)
Accession : YP_005049848.1
Strain :
Genome accession: NC_016628
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1425299 - 1425934 bp
Length : 636 bp
Strand : -
Note : COG0110

DNA sequence :
GTGAGTAACTACTTTGACAACCCATTTTCAGGTCAACCGCTCACCGAACAGGTGACCAATCCTAACATTCACGTGGGTCG
CCACAGCTATTACTCCGGTTATTATCACGGCCACAGCTTCGACGATTGCGTGCGCTATTTAAACCCTGATCGCGAAGATG
TGGATCGGCTGATCATCGGCGCGTTCTGCGCCATCGGCTCCGGCGCAGTCTTTATGATGGCGGGCAATCAAGGCCATCGC
ACCGATTGGGTCAGCACTTTCCCGTTCTTTTATGTCGACGACGATGCCTTTACCGATGCCGACGATGGGTTTGTTCGCGC
TGGCGATACCGTGATTGGTAATGATGTGTGGATTGGTTCAGAAGCGATGATCATGCCCGGCGTGACCATTGGCGATGGTG
CCGTGATTGCCAGCCGTGCGGTGGTGACGAAAAACGTCGCGCCGTATGAAATCGTCGGTTCCAATCCCGCGAAACACATT
CGTTTCCGCTTCACGCCTGAACAGATCGAGACACTCTTGGAGATGCAATGGTGGCATTGGCCAGATGCGCAGCTCAAGGG
GGCAATGAAACTGCTGACATCCGGCGACATCGACGGGTTGTACCACTACTGGCAAAGTAAGATCCGCAACCACTAA

Protein sequence :
MSNYFDNPFSGQPLTEQVTNPNIHVGRHSYYSGYYHGHSFDDCVRYLNPDREDVDRLIIGAFCAIGSGAVFMMAGNQGHR
TDWVSTFPFFYVDDDAFTDADDGFVRAGDTVIGNDVWIGSEAMIMPGVTIGDGAVIASRAVVTKNVAPYEIVGSNPAKHI
RFRFTPEQIETLLEMQWWHWPDAQLKGAMKLLTSGDIDGLYHYWQSKIRNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-54 68
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-53 68
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-53 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 6e-55 68
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 6e-54 68
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 6e-54 68
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 1e-49 63
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 1e-53 62
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase NC_011595.7057349.p0 Protein 5e-28 46
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase NC_010410.6000796.p0 Protein 5e-28 46
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase NC_011586.7045146.p0 Protein 3e-28 46
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 3e-27 46
vfu_B01347 YP_005049848.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 1e-36 45