|
Name : Clocl_0891 (Clocl_0891) Accession : YP_005045496.1 Strain : Clostridium clariflavum DSM 19732 Genome accession: NC_016627 Putative virulence/resistance : Virulence Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 1028125 - 1029369 bp Length : 1245 bp Strand : + Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain DNA sequence : ATGGAAGAAGGAAAGTCGTTTGAGATTTCACGACATCAAGTCCTGGAAGCATACAAACGTGTAAAAGCGAATCATGGTGC AAGTGGAGTTGATGGTGTTAACTTTGAAGAATTTGAAAAGGACTTGAAGAACAACCTATACAAGCTATGGAACAGGATGT CATCAGGGAGCTACTTTCCGAAAGCAGTTAGGGGAGTGGAAATACCAAAGAAAAACGGGAAGAAAAGGTTACTGGGGATA CCGACAATAGAAGACAGAGTGGCACAAATGACCGTCCGCATGAGCTTTGAGCAGTTAGTTGAGCCTATATTTAGTAGTAA TTCATATGGATATAGGCCAAACCGTTCAGCAATTGAAGCGGTAGCAGTAACTAGGGAAAGGTGCTGGAAAACGCCATGGG TATTGGAATTTGACATCAAAGGACTATTTGACAATATAGACCACGAATTATTAAATAGGGCGGTAAGAAAGCATACAGAT AGCAAATGGATTATCCTGTATATTGAGAGGTTTCTAAAAGCAGCAATAAAAATGCCGGACGGGACGATACAGCAAAGGAA ATGCGGAACACCACAAGGCGGAGTAATAAGTCCGGTTTTAGCAAATCTCTTTATGCACTATGCATTTGACATGTGGATGA AGAGGGAATTTCCGGGGAATCAATGGGTAAGATATGCAGACGATGGAATAATTCACTGCAAAACAAAGGAAGAAGCGGAA TATATTTTAGGAAAACTAAAAGAACGAATGCTTAAATGTAAACTTGAGATACACCCGGAAAAGACTCGCATTGTATATTG TAGAAGTGACAAAAATACAGAAAGACACGAGCACGAATCCTTTGATTTTCTTGGGTATACCTTCAGGAGAAGGTTAGTCA AGAGCAAGTATGGCAACTTCTTCAATGCATTTACTCCGGCAGTCAGCAAAGAAGCAAGTCAAAAGTTTAGGGATAGGATA AGAGAAATAAGAAGGAACAACAAAATAGTATCCATAGAAAAGCTTGCGGAAGAAATGAATCCAGTAATACGGGGTTGGGC TAACTACTTTTCAAAATTTTGTTCAAGGGAAGCAATAAAAATATTAAATTATGTGAATCTCTCATTAATCAAGTGGTGTA GGAAAAAGTATAAAAGAATTAGAGGAAGTAAAGGAAAAGCATATAGATATCTGGCACGTCTAGCAAAATCTAAATCTGAT TTATTCTACCACTGGAAAATAGGGATACGTCCGACGATTGGATAA Protein sequence : MEEGKSFEISRHQVLEAYKRVKANHGASGVDGVNFEEFEKDLKNNLYKLWNRMSSGSYFPKAVRGVEIPKKNGKKRLLGI PTIEDRVAQMTVRMSFEQLVEPIFSSNSYGYRPNRSAIEAVAVTRERCWKTPWVLEFDIKGLFDNIDHELLNRAVRKHTD SKWIILYIERFLKAAIKMPDGTIQQRKCGTPQGGVISPVLANLFMHYAFDMWMKREFPGNQWVRYADDGIIHCKTKEEAE YILGKLKERMLKCKLEIHPEKTRIVYCRSDKNTERHEHESFDFLGYTFRRRLVKSKYGNFFNAFTPAVSKEASQKFRDRI REIRRNNKIVSIEKLAEEMNPVIRGWANYFSKFCSREAIKILNYVNLSLIKWCRKKYKRIRGSKGKAYRYLARLAKSKSD LFYHWKIGIRPTIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 1e-98 | 46 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 1e-69 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clocl_0891 | YP_005045496.1 | Retron-type reverse transcriptase | VFG1512 | Protein | 6e-70 | 41 |
