Gene Information

Name : Clocl_0802 (Clocl_0802)
Accession : YP_005045426.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : transposase, IS30 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 924178 - 925239 bp
Length : 1062 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
ATGAGTCACCTTAATAATACCACTAAACGAAGAAGTTTTAAACACCTGGATGTGAGGGAACGGTATCAAATTGAAATATT
ATTGAAAGAAGGTAAGAAACCAAAGGAAATAGCCAAAGTAATGGGAAGGGACAGACGGACTATAGAACGGGAAATAGCTC
GTGGCAGCGTGAGGTTGCTAAACAGCGATCTGACCTATTCAGTGAAGTACTGTGCAGACGTAGGACAACGAAGATATGAA
GAGGCGTCATCAAATAAAGGAGCGGGTTTAAAGATCGGGCATGACCATGAACTAGCCAATTACATAGAGAAGAGGATAAA
AGAGGACAAATATTCGCCGGACGCGGTGATAGGAGAGATAAAAGCCAAAGGGTTAAGGTTCAGAGCCATGATCTGCACAA
AGACGCTATACAACTACATAGACAAAGGGATATTTGCTAATATAAGCAACAAAGACCTTCCGGTAAAGCGGAACAAGAAG
AAGAGGAAATACCGAAGAGTAAGGATAGCATTAAAGAATTTGAGGGGGACAAGCATAGAAGAAAGGCCGGCACATATAGA
AGAAAGAGGAGAATATGGGCATTGGGAGATGGATTGTATAGTTGGCAAAGGCGGAGAAAAGGGAGCAGCATTGTTGGTAC
TGACGGAACGGAGTACGAGGCAGGAGATAATACGTAAGATGCCGGATAAAAGCCAGGCATCGGTAAAGAAAGAGATAGAC
AAACTGGAAAGGAAGTATGGGAAGAAGTTTACCAAACTGTTTAAAACGGTCACAGTAGATAATGGAACAGAGTTTCTGGA
CAGCAAAGGGCTTGAGGCATCAGTGCTTGTTCCTGGTAAGATGAGGTTAAAGATATATTATGCACATCCATACAGTTCAT
GGGAACGAGGGTCGAATGAAAACGCTAATAAGCTGATTCGACGATTTATTCCTAAAGGGACGGATATAGGGAAACTAACG
GAGAAAGAGATAAAAAGGATTGAGCACTGGATGAACAATTACCCAAGGAGAATATTTGGTTATCGAACTGCGAATGAAAT
GGCAAAGATTGTGGTCGCTTAA

Protein sequence :
MSHLNNTTKRRSFKHLDVRERYQIEILLKEGKKPKEIAKVMGRDRRTIEREIARGSVRLLNSDLTYSVKYCADVGQRRYE
EASSNKGAGLKIGHDHELANYIEKRIKEDKYSPDAVIGEIKAKGLRFRAMICTKTLYNYIDKGIFANISNKDLPVKRNKK
KRKYRRVRIALKNLRGTSIEERPAHIEERGEYGHWEMDCIVGKGGEKGAALLVLTERSTRQEIIRKMPDKSQASVKKEID
KLERKYGKKFTKLFKTVTVDNGTEFLDSKGLEASVLVPGKMRLKIYYAHPYSSWERGSNENANKLIRRFIPKGTDIGKLT
EKEIKRIEHWMNNYPRRIFGYRTANEMAKIVVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 1e-44 41
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 1e-46 41
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 2e-45 41
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 2e-45 41
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 1e-45 41
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 8e-46 41
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 5e-46 41
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 2e-46 41
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 1e-46 41