Gene Information

Name : Clocl_0769 (Clocl_0769)
Accession : YP_005045393.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Virulence
Product : gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 887216 - 887911 bp
Length : 696 bp
Strand : +
Note : PFAM: ABC transporter; TIGRFAM: gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit

DNA sequence :
ATGGCAGAGTTGATACTTGAAACAAGGAATTTGAAAAAATACTACGGAAATCAGCTTGCTGTAAAAGACGTTTCATTGAA
GATTCCCAAAGGAACCGTATATGGACTTCTTGGCCCTAATGGAGCCGGAAAGTCTACAACACTAAAGATGATAACAGGTT
TGATGAAGCCGAGTGAAGGCGAGATTATCGCCTTTGGCGAACCATGGCAGCGAAAACATCTTTTGCGGATAGGTTCGCTT
ATCGAAACACCGGCATTGTACGGTAATCTGACAGCAGAAGAAAATCTATTGGTGCATACAAAGCTTATGGGAATACAGAG
AGAAAAGATTTATGAAGTTCTTGAGTTGGTAGATTTAAAAAATACCGGAAAAAAACTTGCTTCTAAGTTTTCAATGGGAA
TGAAGCAGAGGTTGGGAATTGCGATAGCACTTATTGGCGACCCTGAGTTGTTGATTCTTGATGAACCAACCAATGGCCTT
GATCCGGTCGGAATTCAGGAGTTAAGAGATTTAATTTGCTCTTTCCCAAAAAGAGGGATTACAGTGCTTCTTTCAAGCCA
TATATTATCTGAAGTTTCTCAAATTGTCGATAATATAGGCATTATAAGCGAAGGCATACTCAAATACCAAGGTAGGATAA
ATCCTGACGAAAATCTTGAGAAATTGTTTATGAGAGTTGTAAAGGGGGAGAATTAA

Protein sequence :
MAELILETRNLKKYYGNQLAVKDVSLKIPKGTVYGLLGPNGAGKSTTLKMITGLMKPSEGEIIAFGEPWQRKHLLRIGSL
IETPALYGNLTAEENLLVHTKLMGIQREKIYEVLELVDLKNTGKKLASKFSMGMKQRLGIAIALIGDPELLILDEPTNGL
DPVGIQELRDLICSFPKRGITVLLSSHILSEVSQIVDNIGIISEGILKYQGRINPDENLEKLFMRVVKGEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 9e-47 52
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 7e-39 50
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 7e-39 50
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 7e-39 50
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 9e-39 50
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 3e-44 50
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 4e-32 44
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-36 42
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-36 42
glrA YP_004287007.1 spermidine/putrescine import ATP-binding protein potA Not tested Not named Protein 6e-25 41