|
Name : Clocl_0453 (Clocl_0453) Accession : YP_005045101.1 Strain : Clostridium clariflavum DSM 19732 Genome accession: NC_016627 Putative virulence/resistance : Virulence Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 514669 - 515361 bp Length : 693 bp Strand : - Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal DNA sequence : ATGAAAAAAAGGATACTGATAATTGAAGATGAGGTATCTATAGCAGAACTTCAAAGGGATTATCTTGAAATAAACGGATA TGACGTCGATATAGAAAAGACGGGCGATAAAGGACTGGCCCGGGCATTGAAGGAAGATTTTGATCTGATAATTTTAGATT TGATGCTTCCCAATATAGACGGTTTTGAAATATGCCGCAGATTAAGGGAGTCTAAAAATATTCCCATACTTATGGTATCG GCCCGCAAGGAAGATATTGACAAAATCAGAGGTTTAGGGCTAGGTGCCGATGACTACATAACCAAACCTTTCAGTCCGAA CGAACTTGTAGCAAGAGTTACAGCACACATCTCACGCTATGAAAGACTTGTGGGTAGCAATGAGAAAAAATCAAAAACTA TTGCCGTCAGAAACCTTGTAATAGACAAAGATGCTCGGAGAGTATGGGTAGAAGGTCAGGAAGTTACCTTAACCACCAAG GAGTTTGATTTGCTTCTCTTCTTAGCAGAAAATCCAAACAGAGTTTTTTCAAGGGAAGAGCTATTTGATAGAATCTGGAA TATGGATGCTGTCGGCGATGTTTCCACCGTGACGGTGCATATCAAAAAAATAAGGGAAAAAATTGAGTTAGACAGTTCAA AACCCCAATATATTGAAACCATATGGGGTATCGGCTATAGGTTTAAAGTATAG Protein sequence : MKKRILIIEDEVSIAELQRDYLEINGYDVDIEKTGDKGLARALKEDFDLIILDLMLPNIDGFEICRRLRESKNIPILMVS ARKEDIDKIRGLGLGADDYITKPFSPNELVARVTAHISRYERLVGSNEKKSKTIAVRNLVIDKDARRVWVEGQEVTLTTK EFDLLLFLAENPNRVFSREELFDRIWNMDAVGDVSTVTVHIKKIREKIELDSSKPQYIETIWGIGYRFKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 7e-40 | 43 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 4e-40 | 43 |
| SSU05_0907 | YP_001198273.1 | NisR | Not tested | 89K | Protein | 1e-29 | 41 |
| SSU98_0912 | YP_001200470.1 | NisR | Not tested | 89K | Protein | 3e-19 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | HE999704.1.gene2815. | Protein | 5e-46 | 47 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | FJ349556.1.orf0.gene | Protein | 3e-44 | 45 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AM180355.1.gene1830. | Protein | 6e-46 | 44 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AE015929.1.gene1106. | Protein | 1e-35 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_012469.1.7686381. | Protein | 5e-41 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002952.2859905.p0 | Protein | 4e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007622.3794472.p0 | Protein | 4e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002758.1121668.p0 | Protein | 5e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_009641.5332272.p0 | Protein | 5e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_013450.8614421.p0 | Protein | 5e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007793.3914279.p0 | Protein | 5e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_003923.1003749.p0 | Protein | 5e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002745.1124361.p0 | Protein | 5e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_009782.5559369.p0 | Protein | 5e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002951.3237708.p0 | Protein | 5e-43 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AF155139.2.orf0.gene | Protein | 2e-46 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_012469.1.7685629. | Protein | 2e-39 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002758.1121390.p0 | Protein | 6e-39 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_010079.5776364.p0 | Protein | 6e-39 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002952.2859858.p0 | Protein | 6e-39 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007622.3794948.p0 | Protein | 6e-39 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_003923.1003417.p0 | Protein | 6e-39 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_013450.8614146.p0 | Protein | 6e-39 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002951.3238224.p0 | Protein | 6e-39 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007793.3914065.p0 | Protein | 6e-39 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_010410.6002989.p0 | Protein | 6e-40 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_011595.7057856.p0 | Protein | 6e-40 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | EU250284.1.orf4.gene | Protein | 4e-42 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | DQ212986.1.gene4.p01 | Protein | 2e-42 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AE016830.1.gene1681. | Protein | 2e-42 | 42 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_010400.5986590.p0 | Protein | 4e-39 | 41 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_005054.2598277.p0 | Protein | 1e-43 | 41 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AF130997.1.orf0.gene | Protein | 9e-40 | 41 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_014475.1.orf0.gen | Protein | 1e-43 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1563 | Protein | 4e-40 | 43 |
| Clocl_0453 | YP_005045101.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1702 | Protein | 2e-40 | 43 |
