Gene Information

Name : Clocl_4198 (Clocl_4198)
Accession : YP_005048549.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Virulence
Product : glycosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4848637 - 4849278 bp
Length : 642 bp
Strand : -
Note : PFAM: Bacterial sugar transferase

DNA sequence : 
ATGGTTTATTTAAAAATTAAAAGATTAATGGATATTACATTGTCATTAATTGCTGTTATTGTATTAGCTCCTCTTTTTAT
AATAATAACTGTAGCTATAAAGATTGATTCCCAAGGTCCTGTTTTTTTTAAACAAAAAAGAGTAGGTATCCATAAAAAAC
ATTTTAATATTTTGAAGTTTAGGACAATGCGTATTGATACACCGAAGGAAACACCAACCCACTTGCTTGAAAATCCAGAA
CAATGGATAACAAGAGTTGGGAAATTCTTGAGAAAGACTTCATTAGATGAGTTACCTCAGCTTTTCAACATCCTTAAAGG
AGAAATGAGTATCATTGGACCAAGACCTGCGCTTTGGAATCAGTATGATCTCATTGAAGAAAGAGATAAATATGGGGCTA
ATGATGTACCTGTGGGCCTAACCGGTTGGGCACAGGTAAACGGTAGAGATGAGCTATCAATAGAAGAAAAGGCTAAGCTA
GATGGAGAGTACGCTAAGAAGATAAGTTTTATAATGGATTTAAAATGTTTCTTTAGGACAATAGTTTCTGTAATACGTTC
AGAAGGTGTTATTGAAGGCGGAACCGGAAGAAATATAAAAAAGGATGCTACCATTATCAACAAGGAGACAATGGCAAAAT
GA

Protein sequence : 
MVYLKIKRLMDITLSLIAVIVLAPLFIIITVAIKIDSQGPVFFKQKRVGIHKKHFNILKFRTMRIDTPKETPTHLLENPE
QWITRVGKFLRKTSLDELPQLFNILKGEMSIIGPRPALWNQYDLIEERDKYGANDVPVGLTGWAQVNGRDELSIEEKAKL
DGEYAKKISFIMDLKCFFRTIVSVIRSEGVIEGGTGRNIKKDATIINKETMAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-42 52
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-40 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_4198 YP_005048549.1 glycosyl transferase VFG1369 Protein 5e-53 64
Clocl_4198 YP_005048549.1 glycosyl transferase VFG1309 Protein 4e-40 49