Gene Information

Name : Clocl_4152 (Clocl_4152)
Accession : YP_005048507.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4791517 - 4791720 bp
Length : 204 bp
Strand : +
Note : PFAM: Helix-turn-helix

DNA sequence :
ATGAGTAAACTTAAGACGAAAATTAGGGAATACAGATTGTTGCATAATATTAAACAAAGTGAACTGGCAGAATTGGTAAA
TGTCAGACGCGAGACAATTGTTCATCTTGAAAACGGAAAATATAATCCTTCCTTAAAATTGGCAATGGATATAGCAAAAG
TTTTTAATGTTACAGTGGAAGAATTATTTGAGTTTGAAGACTAA

Protein sequence :
MSKLKTKIREYRLLHNIKQSELAELVNVRRETIVHLENGKYNPSLKLAMDIAKVFNVTVEELFEFED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 8e-10 48
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-06 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-06 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_4152 YP_005048507.1 putative transcriptional regulator VFG2175 Protein 7e-07 48
Clocl_4152 YP_005048507.1 putative transcriptional regulator VFG2168 Protein 7e-07 48