Gene Information

Name : Clocl_4112 (Clocl_4112)
Accession : YP_005048470.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4748860 - 4749315 bp
Length : 456 bp
Strand : -
Note : PFAM: Transposase IS200 like

DNA sequence :
ATGGCAAACAAAGAACACAGTTTAGCACGAACTAAATGGATGTGTAAATATCATATAGTATTTACACCTAAGTATAGACG
AAAAATAATTTATAATCAATACAAACAAAGTATAAGGGAAATAATAAAACAACTATGCAAATATAAAGGAGTCGAGATAA
TAGAAGGACATTTGATGCCAGACCATATACATATGTTAGTAAGCATACCACCCAAAATGAGTGTATCAAGCTTTATGGGA
TACTTGAAAGGGAAAAGTGCACTTATGATATTTGATAGACATGCAAACTTAAAATATAAGTTTGGGAACAGACACTTTTG
GGCGGAAGGATACTATGTAAGTACAGTAGGACTAAATGAAGCAACAATTAAGAAATACATACAAGAGCAATATAAACATG
ACATAATGATAGATAAGTTAAGTGTGAAAGAGTATGAAGACCCCTTTAAGGGGTAG

Protein sequence :
MANKEHSLARTKWMCKYHIVFTPKYRRKIIYNQYKQSIREIIKQLCKYKGVEIIEGHLMPDHIHMLVSIPPKMSVSSFMG
YLKGKSALMIFDRHANLKYKFGNRHFWAEGYYVSTVGLNEATIKKYIQEQYKHDIMIDKLSVKEYEDPFKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-39 64
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 8e-40 64
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 4e-44 63
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-40 63
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 7e-37 55