|
Name : Clocl_3911 (Clocl_3911) Accession : YP_005048275.1 Strain : Clostridium clariflavum DSM 19732 Genome accession: NC_016627 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase (class II) Function : - COG functional category : - COG ID : - EC number : - Position : 4521422 - 4522942 bp Length : 1521 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGCCTGAAAGAGATGCAAATAACGATCTTCATAATAGCCAAAATGCAAATGTTGAGTATGAAGACCTCAATGAAATATT GAAAGTGAGAAGGGTGAAACTCGCTGAATTACAGAAAAATGGGAAAGACCCTTTTAAGATTGTAAAATATGATGTTACCC ATTCAACTAAATACATAGTTGATAATTTTGAAAGTATGGAGGGTGCCTTTGTCTCTGTTGCCGGAAGGTTAATGTCAAAA AGAGGAATGGGAAAAGCCAGCTTTTGTGACGTGCGTGATAGAGACGGTAAGATACAGATATATGTTAAAATGGATGAAGT AGGTGCAGAAGTCTATGAAGAATTCAAGAAATTTGATATTGGTGACATAGTTGGAGTAAAGGGAGAAGTATTTAAAACCC ATAAAGGAGAAATATCAGTAAAAGTACAGGAAATAGTGCTTTTATCAAAATCTCTTCAGCCGTTGCCTGAAAAATGGCAT GGATTAAAGGATGTTGATCTAAGATACAGACAGAGATATGTTGACCTGATTGTAAATCCTGATGTCAGAAATACTTTTAT AGTAAGAAGTAAGATAATTAAAGCTATAAGAAAATTCTTGGACGACAGAGGTTTTTTGGAGGTAGAGACTCCAATCCTCA ACACTATACCGGGAGGAGCAGCGGCAAGACCGTTTGTTACACATCATAATACTCTTGATATCGATATGTATTTAAGAATT GCACCTGAGCTTTATTTAAAGCGTCTTATAGTCGGAGGACTGGAAAAAGTTTATGAGATAGGCAGAATGTTTAGAAATGA AGGTATGTCGGTAAAGCATAATCCGGAGTTCACTTTAATGGAAGTGTATGAGGCATATACCGATTACAAGGGAATGATGG AATTAACCGAGCAGCTTATTTCTACTGTGGCCCAAGAGGTTTTGGGAACTACAAAGATTACCTATCAGGGGCAGGAAATT GACCTTACACCTCCCTGGAATAGAATGACCATGATTGAAGCAGTTGAAAAATATGCCGGAGTTAATTTTAATAATATAAC CAGTGACGAAGAGGCTAGGAATATTGCTAAGGAAAAGAAAGTTCACATAGAGGGCAATCCTACAAAGGGAGAAGTACTGA ACCTTATGTTTGAGGAATTTGTGGAAGAACATCTGGTTCAACCCACATTTATTCTGGATTACCCTGTAGAAGTATCTCCT CTTACCAAAAGAAAGCCTGATATGCCATCTTTAACAGAAAGATTCGAGTTGTTTATCACATGCAGAGAAATGGCTAATGC GTACTCGGAGTTGAATGATCCTATTGACCAGAAGGAAAGATTTTTGGATCAGGTTGCAAAGAGGGAAGCTGGGGATGAAG AAGCAAATATGATGGACGATGACTTTATAACAGCACTTGAATATGGAATGCCTCCAACTGGTGGTCTTGGTATCGGAATA GACAGATTGGTTATGCTCTTAACCGATTCCTATTCCATAAGGGATGTACTGTTGTTCCCGACAATGAAACCCAAAGAATA A Protein sequence : MPERDANNDLHNSQNANVEYEDLNEILKVRRVKLAELQKNGKDPFKIVKYDVTHSTKYIVDNFESMEGAFVSVAGRLMSK RGMGKASFCDVRDRDGKIQIYVKMDEVGAEVYEEFKKFDIGDIVGVKGEVFKTHKGEISVKVQEIVLLSKSLQPLPEKWH GLKDVDLRYRQRYVDLIVNPDVRNTFIVRSKIIKAIRKFLDDRGFLEVETPILNTIPGGAAARPFVTHHNTLDIDMYLRI APELYLKRLIVGGLEKVYEIGRMFRNEGMSVKHNPEFTLMEVYEAYTDYKGMMELTEQLISTVAQEVLGTTKITYQGQEI DLTPPWNRMTMIEAVEKYAGVNFNNITSDEEARNIAKEKKVHIEGNPTKGEVLNLMFEEFVEEHLVQPTFILDYPVEVSP LTKRKPDMPSLTERFELFITCREMANAYSELNDPIDQKERFLDQVAKREAGDEEANMMDDDFITALEYGMPPTGGLGIGI DRLVMLLTDSYSIRDVLLFPTMKPKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-119 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clocl_3911 | YP_005048275.1 | lysyl-tRNA synthetase (class II) | VFG1668 | Protein | 6e-120 | 54 |
