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Name : Clocl_3542 (Clocl_3542) Accession : YP_005047942.1 Strain : Clostridium clariflavum DSM 19732 Genome accession: NC_016627 Putative virulence/resistance : Unknown Product : site-specific recombinase, DNA invertase Pin Function : - COG functional category : - COG ID : - EC number : - Position : 4177744 - 4179525 bp Length : 1782 bp Strand : - Note : PFAM: Recombinase; Resolvase, N terminal domain DNA sequence : ATGCATGAAGTTGAAGTAATAAAAGCGAACAGAAGAATATCTGACCGTACTGCAGGAAAAGTAGCGGATATTTTGCGTGT AGCTCCTTATGCAAGAGTTAGTACGGATTCAGAGGAACAATTAAACAGCTATAAATCACAGGTTATGTATTACACAGACT TAGTGAAAAAGCGTAAGGATTGGGTATTGGTTGACATCTATGCTGATGAAGCGATAACAGGTACCCAGGTTACAAAACGT GAAAATTTCCAGCGTATGATTAACGACTGCATGGATGGTAAAATTGATATGATCATAACAAAATCCATATCAAGGTTTGC CAGAAATACCTTGGATACCTTGAAATATGTCCGGATGTTGAAGGAAAGAAATATAGCTGTATTTTTTGAAGATGAAAATA TCAATACATTGACAATGGATGGAGAACTGCTGCTTGTCATATTAAGCTCAGTGGCGCAACAGGAAGTAGAAAACATATCG GCCAATGTGAAAAAAGGCTTGAAAATGAAAATGAAGCGAGGAGAACTGGTTGGCTTCCAGAGCTGCCTGGGGTATGATTA TAATCCTAATGACAAGAGTATATCAATAAATGAAGCGGAAGCTGATATTGTCAGATACATATTTAATCGGTATATTGATG GTGCGGGTGCTTATGTCATAGCAAAAGAGTTAACCAGTCTTGGTTATAAAACCAAAAACGGTAACACAGAATGGCATGAT ACAGCAGTATTAGGAATTATTAAAAATGAAAAATACAAAGGTGATGTTTTGCAGGTTAAGACTTTTACCGTTGATCCAAT TTCCAAGAGAAGACTAGACAATTATGGTGAGGAAGACCAATTCTATATAAAGAACCATCATGAGCCAATAATAAGTGAAG AAATCTTTGAAAAGGCTCAAGCAATCTTAGACAGGAGAGGTGCAAAACGTCGCGGAGTAGAAAAGGGAAAACGTGAAAAA TACAGTAGGCAATATGCTTTTAGCAGCAAGCTGGAGTGTGCCTTTTGCGGAAGTAATTTATCGCGCCGGAACTGGCATAG TGGTAGTGATCATGAAAAGGTTAGCTGGCAATGCGTAACTGCTACAAAAAAAGGCAAGAAATATTGTCCGCCAAGCAAAG CCATTGAAGAAAAAATTCTTGAGGGTGCATTTGTTGAATCATATAAACTGCTATGCCATAATAATTCAGATGTTCTGGAT GAACTTATAGAAAGGATGGAAAGTGTTCTTAGCAAAAATGATTTTCAAAAACAATTAGTAAGAGTAGAAAATGAAATTCA TGCTATTGAGCAGAAACGTAATAGGTTGATTGATATGCGTTTAGAGGAAACGATTGATAAAGCCACTTATGAGAAAAAAT ACAGTGAATTGGAATCAATTTTAGAAGGATTATTAACAGAAAGGGAACAGCTGGAGCAATCCTCCAAGGAAGAAATTAAC CTTGAAAAACGGATTGCACATTTTCGTAAGGTACTAGAAAACAATGAAATTTTAAAGGACTTTGACCGTTGTGTGTTTGA AAGTATTGTAGAAAAGGTTATTATCGGAGAGATTGACGAGAATGGAAATGCTAATCCCTACAAGCTAACCTTTGTATATA AGACCGGATATTCTAATGCAGTGCAGAGTAAAATGCATAAGCAGATTAAAAAAAAGAAAAATGATAAAGGAAATTTGCAT TCCTATTCCTCACCCAACACATGTGGAGAGTGTAGCATTGATGTATCGGCAAAGAGTGTGAAAGAATCATTAAAAGTGTT ACCTTATTATGAAGGGGGTTAA Protein sequence : MHEVEVIKANRRISDRTAGKVADILRVAPYARVSTDSEEQLNSYKSQVMYYTDLVKKRKDWVLVDIYADEAITGTQVTKR ENFQRMINDCMDGKIDMIITKSISRFARNTLDTLKYVRMLKERNIAVFFEDENINTLTMDGELLLVILSSVAQQEVENIS ANVKKGLKMKMKRGELVGFQSCLGYDYNPNDKSISINEAEADIVRYIFNRYIDGAGAYVIAKELTSLGYKTKNGNTEWHD TAVLGIIKNEKYKGDVLQVKTFTVDPISKRRLDNYGEEDQFYIKNHHEPIISEEIFEKAQAILDRRGAKRRGVEKGKREK YSRQYAFSSKLECAFCGSNLSRRNWHSGSDHEKVSWQCVTATKKGKKYCPPSKAIEEKILEGAFVESYKLLCHNNSDVLD ELIERMESVLSKNDFQKQLVRVENEIHAIEQKRNRLIDMRLEETIDKATYEKKYSELESILEGLLTEREQLEQSSKEEIN LEKRIAHFRKVLENNEILKDFDRCVFESIVEKVIIGEIDENGNANPYKLTFVYKTGYSNAVQSKMHKQIKKKKNDKGNLH SYSSPNTCGECSIDVSAKSVKESLKVLPYYEGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-72 | 42 |
