Gene Information

Name : Clocl_3536 (Clocl_3536)
Accession : YP_005047937.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4172041 - 4172718 bp
Length : 678 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGCAATACTTGAAACAAAGGAATTGAAAAAATATTACGGCAGCGGAGAGACCATTGTCCGCGCTGTTGACGGTATCAA
CCTCGCAATAGAGAACGGAGAGTTTGTCGCAATTGTTGGCACATCCGGCAGTGGCAAGTCTACCCTGCTGCATATGATGG
GCGGGCTTGACCGTCCGACAAGCGGTAAGGTTATCGTGGACGGCAAGGATATATTCTCGCTTAAAGATGAGGAACTGACC
ATATTTCGAAGACGAAAAATCGGATTTGTTTTTCAGAACTATAATCTTGTTCCTGTCCTCAACGTGTACGAAAACATTGT
TCTGCCTGTTCAGTTGGACGGGAATGAACCGGACAAACCTTATATAGACAAGATTATCAGAACTTTGGGGCTTGAAAGCA
AGTTGAACAATTTGCCCAACAACCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATTGCCAGAGCTTTGGCTGCAAAACCT
GCTATTATTCTGGCCGATGAACCTACGGGGAATCTGGACAGCAAGACCAGTCTCGATGTGATGGGGCTGCTAAAGGTGAC
AAGCCAGCAGTTCAGTCAAACCATTGTGATGATAACGCACAATGAGGAGATCGCACAGATGGCAGAACGTATCATCCGCA
TTGAGGACGGTAAAATTGTGGGTGGTGACGGGCAATGA

Protein sequence : 
MAILETKELKKYYGSGETIVRAVDGINLAIENGEFVAIVGTSGSGKSTLLHMMGGLDRPTSGKVIVDGKDIFSLKDEELT
IFRRRKIGFVFQNYNLVPVLNVYENIVLPVQLDGNEPDKPYIDKIIRTLGLESKLNNLPNNLSGGQQQRVAIARALAAKP
AIILADEPTGNLDSKTSLDVMGLLKVTSQQFSQTIVMITHNEEIAQMAERIIRIEDGKIVGGDGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_3536 YP_005047937.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 4e-72 72
Clocl_3536 YP_005047937.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 8e-57 61
Clocl_3536 YP_005047937.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 4e-31 45
Clocl_3536 YP_005047937.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-32 43
Clocl_3536 YP_005047937.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 1e-30 42