Gene Information

Name : Clocl_3421 (Clocl_3421)
Accession : YP_005047843.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4031521 - 4032660 bp
Length : 1140 bp
Strand : -
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence :
ATGGGAGTCAATATTAACACCAAACTGGTACATGGTTACAAAGGCTACGATCCGCAAACAGGTGCGGTGAGTTTTCCAAT
ATATCAAAGTGCAACTTTCAGGCATCCCGGTTTGAACCAGTCCACTGGATATGATTATTCAAGGCTTCAGAATCCTACAA
GAGAGGAACTGGAAAAAACTATTGCATTATTGGAGAACGGTAAACACGGATTGGCATTTTCCAGTGGAATGGCTACGGTA
TCTGCAATATTAAAGCTTTTTTCTCCAAAGGATCATATAATTGTTTCTGATGATTTATATGGGGGTACATACCGTATTTT
TGAAGAAATATATAAAAAATACGGTTTGGAATTCAGTTTTGTAGACACCGAATGTATAAAAAATATTGAAGAGAGTATAA
AGCCCAATACTGCAGCCATATTTGTTGAAACTCCGTCAAATCCCATGATGAAAATAACTGATTTACGTGCAGTTGCGGAA
CTTGCAAAATCAAGGGGAATTTTAACTATTGTTGACAATACATTTCTTACACCCTACTATCAAAGACCCCTTGAGCTTGG
AATAGACATTGTACTCCACAGCGGAACGAAATATCTTGCCGGACACAATGACACATTGGCAGGACTTATTGTAGTGTCCG
ATGACGAAATAGCAGAAAAGCTAAGATTAATACAGAAATCTGAAGGAGCTGTGCTGTCACCTTTTGACAGTTGGCTTGTA
TTAAGAGGAATAAAGACTCTTGGTGTACGCCTTGACAGACAGCAATATAATGCACAGAAAATTGCCAATTGGCTAAAAAC
GCATGACAAGGTTGAAAAGGTTTATTATGCTGGACTGCCTGAAAATCCGGGCTATGAAGTACTGTGTAAACAAGCCTCTG
GATTTGGAGCTATGATTTCTTTTCATGTTAAGGATGAAAAACTGGTAGAATCGTTACTTGAGAGGTTAAAAGTTTTCATT
TTTGCTGAAAGTCTTGGGGGAGTTGAAAGTTTGATAACCTATCCTGTAGCGCAGACTCACCAGGCTATACCTCCTCACAT
CAGAGAAAGGTTGGGGGTTAATGAAAAGCTGCTTAGAATATCTGTGGGAATTGAAGATGCAGATGATTTAATACAGGATT
TGGAACAGGCAATGAGGTAG

Protein sequence :
MGVNINTKLVHGYKGYDPQTGAVSFPIYQSATFRHPGLNQSTGYDYSRLQNPTREELEKTIALLENGKHGLAFSSGMATV
SAILKLFSPKDHIIVSDDLYGGTYRIFEEIYKKYGLEFSFVDTECIKNIEESIKPNTAAIFVETPSNPMMKITDLRAVAE
LAKSRGILTIVDNTFLTPYYQRPLELGIDIVLHSGTKYLAGHNDTLAGLIVVSDDEIAEKLRLIQKSEGAVLSPFDSWLV
LRGIKTLGVRLDRQQYNAQKIANWLKTHDKVEKVYYAGLPENPGYEVLCKQASGFGAMISFHVKDEKLVESLLERLKVFI
FAESLGGVESLITYPVAQTHQAIPPHIRERLGVNEKLLRISVGIEDADDLIQDLEQAMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-87 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-88 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-71 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_3421 YP_005047843.1 cystathionine beta-lyase/cystathionine gamma-synthase BAC0207 Protein 2e-61 41