Gene Information

Name : Clocl_3203 (Clocl_3203)
Accession : YP_005047643.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3750008 - 3750361 bp
Length : 354 bp
Strand : -
Note : PFAM: IS66 Orf2 like protein

DNA sequence : 
ATGATAAGATGGAATGAAAAACCAGTGTATCTTTGCGGAAGATTAACGGATATGAGGAAATCTATCAACGGATTAATAAC
ACTGGTACAAGAAAGTTTCTCACTTGATCCGTTTATGAATGCACTGTTTGTGTTCTGTAACAGAGGGAGAAACAGGATAA
AAATCCTTGAATGGGATGGAGATGGGTTTTGGCTGTACTTTAAGCGATTGGAACGAGGGCGATTTCGCTGGCCAACAGAA
GAAGATTCAACCACAATGCTTCTTGATGTAAACGAATTAGCTTGCCTTATCGACAGTGCAAGATTGGAAAAAAAGCTTAG
CCGAAAGGAGGTTTTAGAGCGTCAAATTTCGTAA

Protein sequence : 
MIRWNEKPVYLCGRLTDMRKSINGLITLVQESFSLDPFMNALFVFCNRGRNRIKILEWDGDGFWLYFKRLERGRFRWPTE
EDSTTMLLDVNELACLIDSARLEKKLSRKEVLERQIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 4e-13 47
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 1e-08 43
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 1e-08 43
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-08 42
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 2e-07 42
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 2e-07 42
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-08 41
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 1e-10 41
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-10 41
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 3e-09 41
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 3e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_3203 YP_005047643.1 transposase VFG1737 Protein 5e-09 42
Clocl_3203 YP_005047643.1 transposase VFG1517 Protein 8e-09 41