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Name : Clocl_3161 (Clocl_3161) Accession : YP_005047609.1 Strain : Clostridium clariflavum DSM 19732 Genome accession: NC_016627 Putative virulence/resistance : Virulence Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 3706970 - 3708214 bp Length : 1245 bp Strand : - Note : PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase) DNA sequence : ATGGAAGAAGGAAAGTCGTTTGAGATTTCACGACATCAAGTCCTGGAAGCATACAAACGTGTAAAAGCGAATCATGGTGC AAGTGGAGTTGATGGTGTTAACTTTGAAGAATTTGAAAAGGAGTTGAAGAACAACCTATACAAGCTATGGAACAGGATGT CATCAGGTAGCTATTTGCCAAAAGCAGTAAAGGGAGTGGAAATACCAAAGAAAAACGGGAAGAAAAGGTTACTGGGGATA CCGACAATAGAAGACAGAGTGGCACAAATGACCGTCCGCATGAGCTTTGAGAAGTTAGTTGAGCCTATATTTAGTAGTAA TTCATATGGATATAGGCAAAACCGTTCAGCAATTGAAGCGGTAGCAGTAACCAGGGAAAGGTGCTGGAAAACGCCATGGG TATTGGAATTTGACATCAAAGGACTATTTGACAATATAGACCACGAATTATTAAATAGGGCGGTAAGAAAGCATACAGAG AGCAAATGGATTATCCTGTATATTGAGAGGTTTCTAAAAGCAGCAATAAAAATGCCGGACGGGACGATACAGCAAAGGAA ATGCGGAACACCACAAGGAGGAGTAATAAGTCCGGTTTTAGCAAATCTCTTTATGCACTATGCATTTGACATGTGGATGA AGAGGGAATTTCCGGGGAATCAATGGGTAAGATATGCAGACGATGGAATAATTCACTGCAAAACAAAGGAAGAAGCGGAA TATATTTTAGGAAAACTAAAAGAACGAATGCTTAAATGTAAACTTGAGATACACCCGGAAAAGACTCGCATTGTATATTG TAGAAGTGACAAAAATACAGAAAGACACGAGCACGAATCCTTTGATTTTCTTGGGTATACCTTCAGGAGAAGGTTAGTCA AGAGCAAGTATGGCAACTTCTTCAATGCATTTACTCCGGCAGTCAGCAAAGAAGCAAGTCAAAAGTTTAGGGATAGGATA AGAGAAATAAGAAGGAACAACAAAATAGTATCCATAGAAAAGCTTGCGGAAGAAATGAATCCAGTAATACGGGGTTGGGC TAACTACTTTTCAAAATTTTGTTCAAGGGAAGCAATAAAAGTATTAAATTATGTGAATCTCTCATTAATCAAGTGGTGTA GGAAAAAGTATAAAAGAATTAGAGGAAGTAAAGGAAAAGCATATAGATATCTGGCACGTCTAGCAAAATCTAAATCTGAT TTATTCTACCACTGGAAAATAGGGATACGTCCGACGATTGGATAA Protein sequence : MEEGKSFEISRHQVLEAYKRVKANHGASGVDGVNFEEFEKELKNNLYKLWNRMSSGSYLPKAVKGVEIPKKNGKKRLLGI PTIEDRVAQMTVRMSFEKLVEPIFSSNSYGYRQNRSAIEAVAVTRERCWKTPWVLEFDIKGLFDNIDHELLNRAVRKHTE SKWIILYIERFLKAAIKMPDGTIQQRKCGTPQGGVISPVLANLFMHYAFDMWMKREFPGNQWVRYADDGIIHCKTKEEAE YILGKLKERMLKCKLEIHPEKTRIVYCRSDKNTERHEHESFDFLGYTFRRRLVKSKYGNFFNAFTPAVSKEASQKFRDRI REIRRNNKIVSIEKLAEEMNPVIRGWANYFSKFCSREAIKVLNYVNLSLIKWCRKKYKRIRGSKGKAYRYLARLAKSKSD LFYHWKIGIRPTIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 3e-89 | 46 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 5e-63 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clocl_3161 | YP_005047609.1 | Retron-type reverse transcriptase | VFG1512 | Protein | 3e-63 | 41 |
