Gene Information

Name : Clocl_2817 (Clocl_2817)
Accession : YP_005047290.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3278963 - 3280204 bp
Length : 1242 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence : 
TTGTTAAAGATTGCTGTCGCCGGAACAGGATATGTAGGTTTGTCAATTGCAGTTTTATTGGCACAAAAAAATCAAGTTAC
AGCAGTAGATGTAATTGAAGAAAAAGTAAATAAAATTAATAACAAAATTTCACCGATTGTTGACAAAGAAATTGAAGAAT
ATTTAGCAACTCGCAAATTAAATCTTAAAGCGACAACTGATGGAGATAGTGCATACAAGGACGCTGATTACGTTATTATC
TCCACACCAACCAATTATGATCCGGTTAAGAATTATTTTGATACATCTTCAGTAGAGAGTGTTTTAAAGCAGGTAATGAA
AATAAATCAAAATGCGATTATGGTTATAAAATCTACGGTACCTGTTGGATATACAAAGAAAATTCGAGAAGAATTAGGAT
CGAATAATATTTTTTTCAGCCCTGAATTTTTAAGAGAAGGACGTGCTTTGTACGATAACCTTTATCCAAGCAGAATTATT
GTAGGTGCACCTCAAGATGATAAACGATTGGTAGAAAAGGCAAAGGAATTTGCAGCACTTTTGGTTGATGGTGCAATCAA
AAAAGATATTCCAATTCTATTTACTGATTTAACTGAAGCAGAAGCTATAAAACTTTTTGCAAATACATATTTGGCGCTAC
GTATAGCTTATTTTAATGAGCTGGATACATATGCTGAAATGAGAGGGCTTAATACTAAACAAATTATTGAAGGAATTGGA
TTAGACCCACGCATTGGCAATCATTATAATAATCCATCTTTTGGTTATGGAGGGTATTGCTTACCAAAAGATACAAAACA
ATTATTGGCAAATTATAACGATGTTCCGCAAAACATTATGAAAGCTATTGTTGATGCTAATAGGACGAGAAAAGATTTTA
TTGCAAGCCGTGTATTGGAGAAAGCGGGTTATTACTCGTATGATGAAAATATCGACTATGATGCAAAACGTGAAAAAAAA
GTTGTAATTGGTGTCTATCGCTTAACTATGAAAACAGATAGTGATAACTTCCGTCACAGTTCAATACAAGGAGTTATGAA
ACGTATAAAAGCTAAGGGTGCAACTGTTATTATTTACGAACCAAATTTAAAAGATGGAGATACTTTTTTTGGTAGCCTTG
TGGTTAATGATTTGGAAAAATTCAAATTACAAAGCAATGTTATTATCGCAAATAGGTATGATGCTTGCTTAGATGATGTT
AAGGAAAAAGTATATACAAGAGATATTTTTGGAAGAGACTGA

Protein sequence : 
MLKIAVAGTGYVGLSIAVLLAQKNQVTAVDVIEEKVNKINNKISPIVDKEIEEYLATRKLNLKATTDGDSAYKDADYVII
STPTNYDPVKNYFDTSSVESVLKQVMKINQNAIMVIKSTVPVGYTKKIREELGSNNIFFSPEFLREGRALYDNLYPSRII
VGAPQDDKRLVEKAKEFAALLVDGAIKKDIPILFTDLTEAEAIKLFANTYLALRIAYFNELDTYAEMRGLNTKQIIEGIG
LDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYNDVPQNIMKAIVDANRTRKDFIASRVLEKAGYYSYDENIDYDAKREKK
VVIGVYRLTMKTDSDNFRHSSIQGVMKRIKAKGATVIIYEPNLKDGDTFFGSLVVNDLEKFKLQSNVIIANRYDACLDDV
KEKVYTRDIFGRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-86 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_2817 YP_005047290.1 nucleotide sugar dehydrogenase VFG0963 Protein 1e-103 56