Gene Information

Name : Clocl_2683 (Clocl_2683)
Accession : YP_005047167.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3127225 - 3127578 bp
Length : 354 bp
Strand : -
Note : PFAM: IS66 Orf2 like protein

DNA sequence : 
ATGATAAGATGGAATGAAAAACCAGTGTATCTTTGCGGAAGATATACGGATATGAGGAAATCTATCAACGGATTAATAAC
ACTGGTACAAGAAAGTTTCTCACTTGATCCGTTTATGAATGTACTGTTTGTGTTCTGTAACAGAGGGAGAAACAGGATAA
AAATCCTTGAATGGGATGGAGATGGGTTTTGGCTGTACTTTAAGAGGCTAGAACGAGGGCGATTTCGCTGGCCAACAGAA
GAAGATTCAACCACAATGCTTCTTGATGTAAACGAATTAGCTTGTCTTATTGATAGTGCCAGATTAGAGAAAAAGCTCAG
GAGAAAGGAAGTTTTAGAGCGTCAAATTTCGTAA

Protein sequence : 
MIRWNEKPVYLCGRYTDMRKSINGLITLVQESFSLDPFMNVLFVFCNRGRNRIKILEWDGDGFWLYFKRLERGRFRWPTE
EDSTTMLLDVNELACLIDSARLEKKLRRKEVLERQIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 4e-13 48
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 3e-08 43
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 3e-08 43
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 4e-08 42
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 4e-07 42
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 4e-07 42
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 4e-08 41
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 2e-10 41
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-10 41
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 5e-09 41
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 5e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_2683 YP_005047167.1 transposase VFG1737 Protein 1e-08 42
Clocl_2683 YP_005047167.1 transposase VFG1517 Protein 1e-08 41