Gene Information

Name : Clocl_2655 (Clocl_2655)
Accession : YP_005047145.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3072946 - 3073623 bp
Length : 678 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
TTGAATGCAGTAGTTGAGATAACAAATCTTTATAAAACATATAAACTTGGAACTGTAGATGTTGAAGTGCTGAAAGGCAT
TAATCTATCCATTCAGAGTGGTGAATTTGTCTCCATTATGGGGCCGTCCGGTTCGGGTAAAAGTACGCTTTTATATTTAA
TTGGAGGATTGGATAAGCCCACTTCCGGCAGTGTAAAAATTAAAGGAAAAGAATTGGCTGTCATGAAAGACAAAGAAGAA
AGTATTATGAGAAGAAGAGAAATTGGATTTGTATTCCAGTTTTATAATCTTATACCGAATTTAAATGTAGAGGAAAATAT
TATGCTTCCTGTTCTTTTAGACGGTAAAAGAATTAAAGATTACAGAAAAAAATTGGATGGGCTTCTTGAGATTGTCGGCC
TGTCCGATAGACGCCACCATACGCCCAGAGAATTATCCGGTGGACAGCAGCAAAGGGTAGCTATTGCCAGAGCGTTAATA
AACGAGCCGGATGTTATTTTGGCCGATGAACCTATCGGTAACCTGGACAGTAAATCGGGAACGGAAATCATGCTGCTTTT
AAAGAGGATAAACGAGGAAAAGGGAAAGACAATAATACAAGTTACTCATTCTAAGGAAGCAGCAGAATACGGCAACAGAA
TAATACATGTAAGAGATGGGAGAGTTGAGGAAATATGA

Protein sequence :
MNAVVEITNLYKTYKLGTVDVEVLKGINLSIQSGEFVSIMGPSGSGKSTLLYLIGGLDKPTSGSVKIKGKELAVMKDKEE
SIMRRREIGFVFQFYNLIPNLNVEENIMLPVLLDGKRIKDYRKKLDGLLEIVGLSDRRHHTPRELSGGQQQRVAIARALI
NEPDVILADEPIGNLDSKSGTEIMLLLKRINEEKGKTIIQVTHSKEAAEYGNRIIHVRDGRVEEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-37 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_2655 YP_005047145.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-51 52
Clocl_2655 YP_005047145.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-48 51
Clocl_2655 YP_005047145.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-48 51
Clocl_2655 YP_005047145.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 7e-38 44
Clocl_2655 YP_005047145.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686946. Protein 3e-24 43