Gene Information

Name : Clocl_2245 (Clocl_2245)
Accession : YP_005046760.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.1.-
Position : 2576038 - 2578119 bp
Length : 2082 bp
Strand : -
Note : PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG

DNA sequence :
ATGGAGGAAGATATCAAAGAACTTTTGAAAATGGATGTTCAAAAGGTAAAAGGTGTTGGACAGGCCAGGGCAAAACAGCT
TCACAAGCTTGGAATATATAGCGTTGAAGATATTATTACATACTATCCGAGAGATTATGAAGACAGAAGCAGGCTGAAAA
AAATCGGTGAGCTTGTGGATGGAGAATCCTGCACTTTTGAAGGCATTATTGCATCAAAGGTTACCGAGCATAGATTTAGA
AAAGGTCTTACCATGTATAAAGTGCTGATAAAAGATGAGACAGGGGCTATCACAGCTACCTGGTTTAACCAGCATTATAT
AGGAAAGGTTTTAAAGCCGGGAGAAAGATATATTTTCTTTGGAAAGATATCGGGAAAATACAGAAATCTTGAAGTCCAAA
ATCCCGTTTACGAAAAGTTGGAGGACGGGATAGCCAAAAATGTTCTGAAGATTGTTCCCGTATACCCTTCAACAGCTGAT
TTAAGCCAAAATACTATCAGAGGGGTAATTAGCAATGCCCTTGATTTGGTAGACGGAAGGCTTACCGAATTTCTTCCTGA
AAAGATTTTAAGAGAGTATCGGCTGAGCGAAATAAATTATTCAGTACGGCAAATACATTTTCCCAGAAGTGATGAGGATT
TTAAGAACGCACGGTACAGATTGGTATTTGAGGAATTGTTTATATTACAGCTCTGCCTTCTGAGTGTGAAAAAGGCCTTT
GAAAATAACAATAAGGGTATTGAATTTTCAAAGGTGCCGGAGATGGAGGACTTTATAAAAAGCCTTCCCTTTAAGCTTAC
CGATGCCCAGAGAAAGGTTTTTGAGGAAATAGAAAGGGATATGGAAAGCAGTAATGTCATGAACCGGCTTGTTCAGGGAG
ATGTCGGTTCCGGTAAGACAGTTGTGGCAGCAATGGCACTGTTCAAAGCGGTACGAAACGGATATCAGGGTGCATTGATG
GTTCCTACGGCAATTTTGGCAGAGCAGCATTATCAATTAATAAGCAGCCTAATGGAACCTTTCGGTATCAATACAGCCTT
GCTGACAGGAAACCAGACGAAGAATCAGAAAAATGAAATACTGGAAGGGATAAGGTCGGGAAAGATTGATATTTTGATAG
GTACCCATGCACTGATTGAAGATAATGTAGAATTTATGAAATTGGGACTGGTCATTACCGACGAACAGCACCGTTTCGGT
GTAAGGCAGAGAGCGTTGCTGTCAAAGAAGGGAGAGGCACCGGATGTTATTGTAATGACTGCAACACCTATCCCCAGAAC
ATTGGCTCTGATTTTATACGGTGACCTGGATATATCCATTATAGACCAGCTGCCGCCGGGGAGAAAGCCGGTTAAGACTT
ATGCTGTAGATGAGAGCATGAGGGAAAGGGTAAACGGATTTATAAGAAAAGAGGTCAGTGAAGGAAGGCAGGTATATATT
GTATGCCCTCTGGTGGAAGAATCAAGTGAAATAGAAGCCAAATCGGCGGTACAACATGCCAAAGACATTGCAGAAAAGGA
TTTTAGGGACCTTAAAGTGGGGCTATTACATGGCAAGATGAAATCTAAAGAAAAAGAAGAGGTAATGAAAAAATTTGTTG
AGGGAGAAATTGATATTCTTGTCTCGACTACTGTGATTGAGGTTGGTGTCAATGTTCCCAATGCGTCAATAATGGTTGTG
GAAAATGCCGAGAGATTTGGCTTGGCTCAGCTGCATCAGCTGAGGGGAAGAGTTGGGAGAGGTAAGCATCAATCCTATTG
TATTCTCTATAGTGATGGAAAAACACAGGTGTGCAGGGAGAGAATGAAAATAATGCAAAAAACCAACGATGGCTTTGTAA
TATCCGAAAAAGACCTGGAATTAAGAGGACCTGGAGAGTTTTTCGGTACAAGGCAGCATGGTATACCGGAACTTAAAATT
GCCAACCTGTATAAGGATATCGATATTTTGAAAAAAGCTCAGGAAGCGGCTTTGAAGCTTATCAGCGAGGATAGGGACCT
TGAAAAAGAAGAAAATTACGGCTTAAAATTAAAAATGATGGAGATACTAAATGAAAAACTTTATAATATAACAATGAATT
AA

Protein sequence :
MEEDIKELLKMDVQKVKGVGQARAKQLHKLGIYSVEDIITYYPRDYEDRSRLKKIGELVDGESCTFEGIIASKVTEHRFR
KGLTMYKVLIKDETGAITATWFNQHYIGKVLKPGERYIFFGKISGKYRNLEVQNPVYEKLEDGIAKNVLKIVPVYPSTAD
LSQNTIRGVISNALDLVDGRLTEFLPEKILREYRLSEINYSVRQIHFPRSDEDFKNARYRLVFEELFILQLCLLSVKKAF
ENNNKGIEFSKVPEMEDFIKSLPFKLTDAQRKVFEEIERDMESSNVMNRLVQGDVGSGKTVVAAMALFKAVRNGYQGALM
VPTAILAEQHYQLISSLMEPFGINTALLTGNQTKNQKNEILEGIRSGKIDILIGTHALIEDNVEFMKLGLVITDEQHRFG
VRQRALLSKKGEAPDVIVMTATPIPRTLALILYGDLDISIIDQLPPGRKPVKTYAVDESMRERVNGFIRKEVSEGRQVYI
VCPLVEESSEIEAKSAVQHAKDIAEKDFRDLKVGLLHGKMKSKEKEEVMKKFVEGEIDILVSTTVIEVGVNVPNASIMVV
ENAERFGLAQLHQLRGRVGRGKHQSYCILYSDGKTQVCRERMKIMQKTNDGFVISEKDLELRGPGEFFGTRQHGIPELKI
ANLYKDIDILKKAQEAALKLISEDRDLEKEENYGLKLKMMEILNEKLYNITMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-87 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_2245 YP_005046760.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-107 42