Gene Information

Name : Clocl_2200 (Clocl_2200)
Accession : YP_005046716.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2526197 - 2527072 bp
Length : 876 bp
Strand : -
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGGAACAAAAGCGTTACGAGTTAAATAAAGAATTGGCACAGATGTTAAAAGGCGGAGTAATCATGGATGTTACCAGTCC
GGAACAGGCCATCATTGCGGAAAAGGCTGGGGCCTGCGCCGTAATGGCATTGGAAAGAATTCCTGCCGATATAAGGGCAG
CGGGCGGCGTGGCAAGAATGAGCGACCCAAAACTGATAAAAGAGATACAAAGTGCAGTATCCATTCCTGTCATGGCCAAA
TGCCGTATCGGCCATTTTGTAGAGGCTCAGATACTGGAAGCACTTGAAATCGATTATATAGATGAGAGTGAAGTGCTGAC
ACCGGCCGATGATTTATACCATATTGACAAAACCAAGTTTAAAGTGCCTTTTGTATGCGGCGCCAGGGATTTAGGGGAGG
CTTTAAGGAGAATCAATGAGGGCGCTTCAATGATCAGAACGAAAGGAGAGGCGGGAACGGGAGATATTATTCAGGCAGTA
CGCCATTTGAGGACAATGAACCGCCAGATTGCAAGAATCGTATCCATGCGTGAGGATGAGCTTTACAATGAAGCCAAGGA
ACTGCAGGTACCCTATGAACTGGTACTGTATGTTCACAAAAACGGCAGACTTCCGGTGGTGAATTTTGCGGCAGGAGGCG
TGGCTACACCGGCGGATGCGGCATTGATGATGCAGCTTGGAGCAGAAGGAGTATTTGTAGGTTCGGGAATTTTTAAATCC
GGTAATCCGGAAAAGAGGGCTAATGCCATTGTAAAGGCAGTGACCAATTATAACGACTATAAAATGCTTGCTGAACTCTC
AGAAGACTTGGGAGAAGCAATGGTGGGTATAAATGAGCAGGAAATAGAGCTTCTTATGTCTGAAAGGGGCAAGTAA

Protein sequence :
MEQKRYELNKELAQMLKGGVIMDVTSPEQAIIAEKAGACAVMALERIPADIRAAGGVARMSDPKLIKEIQSAVSIPVMAK
CRIGHFVEAQILEALEIDYIDESEVLTPADDLYHIDKTKFKVPFVCGARDLGEALRRINEGASMIRTKGEAGTGDIIQAV
RHLRTMNRQIARIVSMREDELYNEAKELQVPYELVLYVHKNGRLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
GNPEKRANAIVKAVTNYNDYKMLAELSEDLGEAMVGINEQEIELLMSERGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-83 72
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-83 71
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-83 71