Gene Information

Name : Clocl_2133 (Clocl_2133)
Accession : YP_005046651.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Virulence
Product : lipoprotein signal peptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2444085 - 2444558 bp
Length : 474 bp
Strand : -
Note : PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase

DNA sequence : 
ATGATTTGGGTAGTAATTATTTTGGCGATAATAGGACTGGATCAGTTTACAAAGTATTTGGTCATGAATAACATCGCCTT
TGGCGAGAAAATACCGGTGATTGACGGTTTTTTTTATCTGGCCCATTGGAAAAACACCGGTGCTGCATGGGGAATTCTGG
AAGGATGGAGATTTTTTTTAATTCCGGTTACAATAATTGTGTCGATTATTTTAGCCCATTACCTTGTAAAGTCGGATAAC
AAAATTTTTAAGTTATCCCTGTCAATGATATTGGGCGGGGCAATCGGAAACTTGATAGATCGTGCTTTTAGAAACGGTGG
GGTTGTTGACTTTTTGGATTTCCATTTTTGGTCATACAATTTTCCTACTTTTAATGTTGCCGATTGCTTTATTGTGATTG
GTACTCTGTGTTTATCCTACTATATTTTGTTTGTTATGAAGGATGAAAAAAATATTGAAAACAATGAGTTATAA

Protein sequence : 
MIWVVIILAIIGLDQFTKYLVMNNIAFGEKIPVIDGFFYLAHWKNTGAAWGILEGWRFFLIPVTIIVSIILAHYLVKSDN
KIFKLSLSMILGGAIGNLIDRAFRNGGVVDFLDFHFWSYNFPTFNVADCFIVIGTLCLSYYILFVMKDEKNIENNEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0072 NP_763627.1 lipoprotein signal peptidase Not tested SCCpbp4 Protein 2e-06 44
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 7e-12 42
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-11 42
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 7e-12 42
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 4e-13 41
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 4e-13 41
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 4e-13 41
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 6e-13 41
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 6e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_2133 YP_005046651.1 lipoprotein signal peptidase VFG2161 Protein 4e-17 45