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Name : Clocl_1950 (Clocl_1950) Accession : YP_005046476.1 Strain : Clostridium clariflavum DSM 19732 Genome accession: NC_016627 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : - COG ID : - EC number : - Position : 2242822 - 2243628 bp Length : 807 bp Strand : - Note : PFAM: FliP family; TIGRFAM: type III secretion apparatus protein, YscR/HrcR family; flagellar biosynthetic protein FliP DNA sequence : ATGCTGCAGGCGGAGATGAAAACACCAATGAGAAAAAAAAGTAGACTGTTTATAGCACTGACAATATTATTTATAGTTTT GACAGCTTTTGCATTAAATGTATACGCTGAGCCTGATTTGGCATTGCCTAAAGTTGATGTAACGGTAGGGACTTCCGACA ATCCGGAAGATGTTACGTCAAGTATACAAATTTTACTGCTTTTAACTGTATTGTCTTTGGCACCATCTATATTGATAATG ATGACAAGTTTTACAAGAATAATAATTGTTCTCTCTTTTTTCAGAAATGCGCTGGGAACACAGCAGATGCCGCCGAATCA AGTGTTGATTGGGCTAGCTTTGTTTTTGACCTTATTTATTATGAGTCCGGTGATTAATGAGATTAATGAGAATGCTTACA AACCCTATGCAAATAAGGAAATAACTCAGCAGGTTGCTTTTGAAAGGTCATCAAAAACTATAAAAAGTTTTATGCTAAAG CATACAGAAAAGAAAGATTTAGCTTTGTTTGTATCACTTTCCGGGACTAAAACCCCAATTAAGGAAGAAGATATACCCAA TTTGCCATTGACAGTAATAATTCCTGCTTTCTTAATAAGTGAGCTAACAATTGCCTTTAAGATGGGCTTTTTGATATATT TACCTTTTCTTGTGATAGATATTGTTGTTTCAAGTACTTTGATGTCCATGGGAATGATGATGCTTTCACCAGTTATGATT TCTCTTCCCTTTAAAGTACTTCTTTTTATAATGGTTGGAGGTTGGAATCTTCTCACGCAAATGATTGTAAACAGCTTTGT AACATAG Protein sequence : MLQAEMKTPMRKKSRLFIALTILFIVLTAFALNVYAEPDLALPKVDVTVGTSDNPEDVTSSIQILLLLTVLSLAPSILIM MTSFTRIIIVLSFFRNALGTQQMPPNQVLIGLALFLTLFIMSPVINEINENAYKPYANKEITQQVAFERSSKTIKSFMLK HTEKKDLALFVSLSGTKTPIKEEDIPNLPLTVIIPAFLISELTIAFKMGFLIYLPFLVIDIVVSSTLMSMGMMMLSPVMI SLPFKVLLFIMVGGWNLLTQMIVNSFVT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-23 | 45 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 1e-23 | 45 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 5e-23 | 45 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 5e-23 | 45 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-23 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clocl_1950 | YP_005046476.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 6e-39 | 55 |
| Clocl_1950 | YP_005046476.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 6e-40 | 53 |
| Clocl_1950 | YP_005046476.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 6e-39 | 50 |
| Clocl_1950 | YP_005046476.1 | flagellar biosynthetic protein FliP | VFG0519 | Protein | 6e-24 | 45 |
| Clocl_1950 | YP_005046476.1 | flagellar biosynthetic protein FliP | VFG0044 | Protein | 1e-25 | 42 |
| Clocl_1950 | YP_005046476.1 | flagellar biosynthetic protein FliP | VFG0394 | Protein | 5e-23 | 41 |
