Gene Information

Name : Clocl_1506 (Clocl_1506)
Accession : YP_005046077.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1739863 - 1740216 bp
Length : 354 bp
Strand : -
Note : PFAM: IS66 Orf2 like protein

DNA sequence : 
ATGATAAGATGGAATGAAAAACCAGTGTATCTTTGCTGTAGATATACGGATATGAGGAAATCCATCAACGGATTAATAAC
ACTGGTACAAGAAAGCTTTTCACTTGATCCGTTTATGAATGCACTGTTTGTGTTCTGTAACAGAAATAGAAACAGGATAA
AAATCCTTGAATGGGATGGAGATGGGTTTTGGCTATACTTTAAGCGATTGGAACGAGGTCGATTTCGCTGGCCAACAGAA
GAAGATTCAACCACAATGCTTCTTGATGTAAAAGAATTAGCTTGCCTTATCGACAGTGCAAGATTGGAAAAAAAGCTTAG
CCGAAAGGAGGTTTTAGAGCGTCAAATTTCATAA

Protein sequence : 
MIRWNEKPVYLCCRYTDMRKSINGLITLVQESFSLDPFMNALFVFCNRNRNRIKILEWDGDGFWLYFKRLERGRFRWPTE
EDSTTMLLDVKELACLIDSARLEKKLSRKEVLERQIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 1e-12 47
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 1e-08 44
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 1e-08 44
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 3e-08 42
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 3e-08 42
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 2e-07 42
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 2e-07 42
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 4e-08 41
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 1e-10 41
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-10 41
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 5e-09 41
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 5e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_1506 YP_005046077.1 transposase VFG1517 Protein 2e-08 41