Gene Information

Name : Clocl_1469 (Clocl_1469)
Accession : YP_005046042.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1690582 - 1691883 bp
Length : 1302 bp
Strand : +
Note : PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase

DNA sequence :
ATGAGAATGTATGACGTTATTGAAAAAAAGCGTGATGGAAAAGAATTGAGCTATGATGAAATCAGTTACTTTATAAACAA
CTACTGCAATGATTTAATACCAGATTATCAGGTTGCTGCTTTGCTTATGGCTATATTTTTGAACGGAATGAGTGAAAGGG
AAACAGCAGATTTAACTGAAATTATGGCTAATTCCGGTGATGTAATAGACCTTTCAGCTATTGACGGTATAAAGGTGGAT
AAGCATAGCACCGGAGGGGTTGGAGATAAGACTACTCTTGTCGTAGGACCGATTGTAGCTGCCTGTGGAGTCCCGGTGGC
AAAAATGTCCGGAAGGGGCTTGGGGCACACTGGTGGGACAATAGACAAGCTTGAGTCAATCCCTGGGTTAAAAACTGCCC
TTTCAAAGGAAGAATTTATAGAAAATGTAAATAGAATTGGTATTTCTGTGGCAGGACAGACCGGAAACCTTGCCCCGGCT
GACAAGAAGATATATGCCCTTAGAGATGTTACAGCTACAGTTAACAGTATTCCTTTGATTGCAAGCAGTATAATGAGCAA
AAAGATTGCTTGTGGGGCCGATAGAATAGTCCTTGATGTAAAGACCGGCAGCGGAGCTTTTATGAAAACCTTGGAAAAGT
CAGAAGAACTGGCTCGTTGTATGGTAAAGATAGGTAATAATCTTGGCAAAAAAACCGTTGCCATTGTTACAGATATGGAT
ATTCCGCTGGGAAATGCCATCGGCAATTCTCTTGAGGTTATTGAAGCTATAGATACATTAAAGGGGAACGGACCTAAAGA
CCTTGAGGAAGTGTCTCTGTGTTTGGCAGCCAAAATGCTGGAACTTGCAGGAATAGGGGATGAAAGTTACTGTAAGCAAA
GAGCAAGAGAGGTGCTGGAAAATGGACAGGCACTCGAAAAATTTGCCCAAATGATAGAAAGACAGGGCGGAATACCTGAT
GTCATAGAAGATTATGATCTTTTCAAAAAGCCGAGACATATGTATGAGTTTACTTCGGAACAAGATTGCTGTATAGAAAA
GATCAGAACTGATATGTTGGGCATTTCATCGATGATTTTAGGTGCCGGCAGGGAAACAAAAGAAAGTGCAATAGATTATT
CGGCCGGTATAAAGCTTTATAAGAAAACAGGAATGTCTGTAAAAAAAGGAGAATTAATAGCAACTTTATATTCCGATGAT
ACCGAAAAAATAAATCAAGCTCTTGAAACTTTGAAAAAGAGCCTGGTACTTGGCGATTCGGTTGAACCTCAAAGGCCTTT
GATCCTCTCATATGTTGAATAG

Protein sequence :
MRMYDVIEKKRDGKELSYDEISYFINNYCNDLIPDYQVAALLMAIFLNGMSERETADLTEIMANSGDVIDLSAIDGIKVD
KHSTGGVGDKTTLVVGPIVAACGVPVAKMSGRGLGHTGGTIDKLESIPGLKTALSKEEFIENVNRIGISVAGQTGNLAPA
DKKIYALRDVTATVNSIPLIASSIMSKKIACGADRIVLDVKTGSGAFMKTLEKSEELARCMVKIGNNLGKKTVAIVTDMD
IPLGNAIGNSLEVIEAIDTLKGNGPKDLEEVSLCLAAKMLELAGIGDESYCKQRAREVLENGQALEKFAQMIERQGGIPD
VIEDYDLFKKPRHMYEFTSEQDCCIEKIRTDMLGISSMILGAGRETKESAIDYSAGIKLYKKTGMSVKKGELIATLYSDD
TEKINQALETLKKSLVLGDSVEPQRPLILSYVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 2e-84 46