Gene Information

Name : Clocl_1467 (Clocl_1467)
Accession : YP_005046040.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1688215 - 1689099 bp
Length : 885 bp
Strand : +
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD

DNA sequence :
ATGGAAGATTTGGTTTTGAAATTTCTTACCTTTTTGGAGAAGGATAAGCGTTTGTCACTCAATACCTTACAGTCGTACAG
GAGGGATATTGAACAGTACATTACATATTTAAGCGAAATGAAGATACATAATATTACAAATACCAATAAAACTACTGTAA
TTGCTTACCTCCTGCATTTGCAAAAAAAGGGACGTGCAACTTCTACAATATCTAGAAACCTTGCATCTATAAGATCTTTC
TACCAGTTCTTAACTAAAAACGGTGTAATTAGCAGTGATCCCACAGAGGATCTTGAATCACCTAAAGTTGAAAAGAAATT
ACCTCAAATTCTTTCGACAAAAGAAGTAGAACTTTTGCTTGAACAACCGAAATGCGATGACCTTAAAGGATATAGAGACA
AAGCAATGCTTGAACTGCTGTATGCTACAGGAATAAGGGTTTCAGAACTGATATGCCTTAATGTATCCGATGTAAATCTT
GATATGGGATTTATAAGATGCAATAAGGGAAACAAAGAAAGAATGGTTCCCATAGGATCTGCGTCGATTCAAGCTTTAAA
TGAATACCTGACAAAATCAAGGAACCTGTTGATTCAAAGAAGTGATGAAAAAGCACTGTTTGTTAATGTGAACGGTAAAA
GACTTACAAGACAAGGTTTTTGGAAAATAATCAAGCAGTATAAAAATCAGGCAAAGATAAATAAGGATATAACTCCGCAT
ACGTTGAGGCATTCCTTTGCAGCACATCTTTTGGAAAATGGAGCCGATTTGAAGTCAATACAAGAAATGTTAGGACATTC
GGATATTTCATCAACCCAAGTTTATGCTCAAATTGCCAAGAACAGAATTAGAGAAGTTTATAAAAAGACTCATCCGAGAG
CATAA

Protein sequence :
MEDLVLKFLTFLEKDKRLSLNTLQSYRRDIEQYITYLSEMKIHNITNTNKTTVIAYLLHLQKKGRATSTISRNLASIRSF
YQFLTKNGVISSDPTEDLESPKVEKKLPQILSTKEVELLLEQPKCDDLKGYRDKAMLELLYATGIRVSELICLNVSDVNL
DMGFIRCNKGNKERMVPIGSASIQALNEYLTKSRNLLIQRSDEKALFVNVNGKRLTRQGFWKIIKQYKNQAKINKDITPH
TLRHSFAAHLLENGADLKSIQEMLGHSDISSTQVYAQIAKNRIREVYKKTHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-47 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-47 43