Gene Information

Name : Clocl_1412 (Clocl_1412)
Accession : YP_005045987.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1626729 - 1627082 bp
Length : 354 bp
Strand : +
Note : PFAM: IS66 Orf2 like protein

DNA sequence : 
ATGATAAGATGGAATGAAAAACCAGTGTATCTTTGCGGAAGATTAACGGATATGAGGAAATCTATCAACGGATTAATAAC
ACTGGTACAAGAAAGTTTCTCACTTGATCCGTTTATGAATGCACTGTTTGTGTTCTGTAACAGAGGGAGAAACAGGATAA
AAATCCTTGAATGGGATGGAGATGGGTTTTGGCTGTACTTTAAGAGGCTAGAACGAGGGAGATTTTGCTGGCCAACAGAA
GAAGATTCAACCACAATGCTTCTTGATGTAAACGAATTAGCTTGTCTTATTGATAGTGCCAGATTAGAGAAAAAGCTCAG
GAGAAAGGAAGTTTTAGAGCGTCAAATTTCGTAA

Protein sequence : 
MIRWNEKPVYLCGRLTDMRKSINGLITLVQESFSLDPFMNALFVFCNRGRNRIKILEWDGDGFWLYFKRLERGRFCWPTE
EDSTTMLLDVNELACLIDSARLEKKLRRKEVLERQIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 2e-12 47
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 6e-09 43
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 6e-09 43
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 9e-09 42
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 1e-07 42
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 1e-07 42
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-08 41
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 5e-11 41
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-11 41
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 2e-09 41
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 2e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_1412 YP_005045987.1 transposase VFG1737 Protein 3e-09 42
Clocl_1412 YP_005045987.1 transposase VFG1517 Protein 9e-09 41