Gene Information

Name : Clocl_1276 (Clocl_1276)
Accession : YP_005045857.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1475057 - 1475719 bp
Length : 663 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :

ATGATTGAACTAAAAAACATATCAAAGTCATATAAAGGAAAAGGAGTGTTTACTAGAGCTTTGGTTAATGTTTCTTTGAG
AGTTGAGCCTGGTGATTTTATTGCTATAATGGGAAGATCCGGATCAGGGAAAACAACATTATTGAATATATTAGGCTGTA
TGGATAGATTTGATGAAGGTGAGTATTTATTTGATAATGTAAACATTCATAAATATCGTGAAAAAGAGCTGGCAAATTTC
CGTAATAAAAACATTGGTTTTATATTCCAAGCTTTTAACTTAATAAATGATATGACTGCTGTTGAAAATGTTGAATTACC
AATGGGGTTTGCCGGATTAAATAGTAGGGAAAGAAGAACAAATGCTATGAAACTGTTAGATGATGTGGGACTTAAAGATA
AAGCCTTCAACAAGCCGTTGGAATTATCTGGAGGGCAACAGCAAAGAGTTGCAATAGCAAGGGCATTAGCTAATAATCCT
AAGATAATTTTAGCTGATGAGCCAACTGGAAATTTAGATGAAGAGTCCGGATTTCAGATAATGGACCTATTGAAAAATTT
AAATAATCAAAAAAAGGTTACGATTATAATGGTAACACATGATGAACAAATAGCTAAGTATGCAGATAGGATTGTCTATA
TGAGAGATGGGGTTTTATTATAA

Protein sequence :

MIELKNISKSYKGKGVFTRALVNVSLRVEPGDFIAIMGRSGSGKTTLLNILGCMDRFDEGEYLFDNVNIHKYREKELANF
RNKNIGFIFQAFNLINDMTAVENVELPMGFAGLNSRERRTNAMKLLDDVGLKDKAFNKPLELSGGQQQRVAIARALANNP
KIILADEPTGNLDEESGFQIMDLLKNLNNQKKVTIIMVTHDEQIAKYADRIVYMRDGVLL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	4e-32	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Clocl_1276	YP_005045857.1	antimicrobial peptide ABC transporter ATPase	NC_012469.1.7686878.	Protein	2e-47	53
Clocl_1276	YP_005045857.1	antimicrobial peptide ABC transporter ATPase	NC_008702.1.4606598.	Protein	4e-37	46
Clocl_1276	YP_005045857.1	antimicrobial peptide ABC transporter ATPase	NC_012469.1.7685735.	Protein	3e-37	45
Clocl_1276	YP_005045857.1	antimicrobial peptide ABC transporter ATPase	CP001581.1.gene598.p	Protein	7e-34	43
Clocl_1276	YP_005045857.1	antimicrobial peptide ABC transporter ATPase	CP001581.1.gene798.p	Protein	2e-36	43