|
Name : Clocl_0124 (Clocl_0124) Accession : YP_005044800.1 Strain : Clostridium clariflavum DSM 19732 Genome accession: NC_016627 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 136023 - 137363 bp Length : 1341 bp Strand : + Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase DNA sequence : ATGGATATAGGTTCATTAGGTAGGATACCCCCGCAAAATATAGAGGCGGAACAGTCTGTACTTGGTGCAATACTTCTTGA CAAGGAAGTATTGACAAGTGTAATAGAAATAATTAGCAGTGAAGATTTTTACAGGGACGATCATAAGGAAATATTTGATG CCATCATTGACCTTTATGAAAAAGGCGAACCTATAGACCTTATTACAGTAGCTGAAAGGCTTAAGTTGAGGGGAACATTG GACAGTGTCGGTGGCCTTGAATACCTTACTAGTCTTGCTAACATTGTACCTACTACCGAAAATGCCAAACATTATGCAAA GATTGTTGAGGAAAAAGCAATATTAAGGAAACTGATTAAGGTTTCGACAAATATAATAAACATGGGCTATGAAGCTTCCG AAGAAGTTGCTTATGTATTGGATAAGGCCGAAAAGGGAATATTTGACCTTCTGCAAAAAAGAAATACTCAAGGGTTTGTC CCTATAAAGGACGTTTTGGTGGATACTTTTAACCGCTTGGAAGAGTTATATAACAGTAAGGGATATATAACGGGAATTCC CACCGGCTTTATAGACTTAGATTACAAGACAGCAGGTCTTCATAATTCAGACCTGATACTTATTGCTGCAAGGCCTGCAA TGGGAAAGACAGCCTTTGTGCTTAATATAGCTCAGCATGCAGCAATACATTCGAAAATACCTGTAGCCATATTCAGCCTT GAAATGTCTAAAGAACAGTTGGTAAACAGAATGCTAGCCAGTGAAGCAATGGTTGATAGCCAAAAAATGCGAACCGGAAA ACTTGAAGACAGTGACTGGCAGAAGGTTGCAAGAGCTTTAGGGCCTTTATCGGAAGCACCTATATATATAGATGATACTC CGGGTGCGTCCATAATGGAAATTAGGGCAAAGTGCAGAAGATTAAAAATTGAAAAAAATCTTGGCCTGATAGTAATTGAC TATCTTCAGCTTATGCAGGGTAAGAGCGGCAGATCAGAGAACCGCCAGCAGGAAATATCGGAAATATCAAGGTCACTGAA AATTCTTGCCAAGGAAATAAATGTTCCTGTAATTACACTTTCACAGCTTAGTCGTGCTCCGGAACAAAGGCAGGATCATA GGCCGATCTTAAGCGATCTGAGAGAGTCGGGAGCTATTGAGCAGGATGCAGATATAGTCATGTTTTTATATAGGGATGAT TATTACAACCCGGATACCGACAAAAAAAATGTGGCAGAGGTCATTATTGCAAAGCATAGAGCGGGTTCTACCGGAACTGT TGAGCTTGCATGGCTTGGGCAATATACCAAGTTTGCTAACTTGGAGAAATATAGGGAATAG Protein sequence : MDIGSLGRIPPQNIEAEQSVLGAILLDKEVLTSVIEIISSEDFYRDDHKEIFDAIIDLYEKGEPIDLITVAERLKLRGTL DSVGGLEYLTSLANIVPTTENAKHYAKIVEEKAILRKLIKVSTNIINMGYEASEEVAYVLDKAEKGIFDLLQKRNTQGFV PIKDVLVDTFNRLEELYNSKGYITGIPTGFIDLDYKTAGLHNSDLILIAARPAMGKTAFVLNIAQHAAIHSKIPVAIFSL EMSKEQLVNRMLASEAMVDSQKMRTGKLEDSDWQKVARALGPLSEAPIYIDDTPGASIMEIRAKCRRLKIEKNLGLIVID YLQLMQGKSGRSENRQQEISEISRSLKILAKEINVPVITLSQLSRAPEQRQDHRPILSDLRESGAIEQDADIVMFLYRDD YYNPDTDKKNVAEVIIAKHRAGSTGTVELAWLGQYTKFANLEKYRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-77 | 43 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 9e-72 | 42 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 7e-78 | 41 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-72 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-72 | 41 |
