Gene Information

Name : Clocl_1090 (Clocl_1090)
Accession : YP_005045689.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1281640 - 1283394 bp
Length : 1755 bp
Strand : +
Note : PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGAGAAAAACCAAGATAATTTGTACATTAGGACCAGCGGTTGACAATGAAGATATTTTAAGAAAATTGATGTTAAAAGG
CATGGATATTGCCCGGTTAAATTTTTCCCATGGAACACATGAGGAACACAAAATACGTGTTGACCGTTTGAAAAAGATCA
GGGAAGAATTGAATTTACCTGTTGCACTGCTTTTAGATACAAGGGGACCTGAAATCAGACTGGGCAATTTTGAGAAGGGG
GAAGTAGTACTAAAAGAAGGCGAAAGATTTGTTTTGGTCAATGATGACATTCTCGGAGATGAAACTAAATGTTCGGTTTC
CTATAAGGAATTATATAAGGATGTGAAAAAGGGAAACAGAATTCTTATCAATGACGGGTTGGTGGAACTTGAGGTAATCA
ATATAAAAGACAAGGATATTATATGTGAAGTCCTAAACGGAGGAACTATTGGTAATCATAAAGGGGTTAACGTTCCTGGA
GTTAAAGTTAATTTGCCTTCATTGACTGAAAAGGATATAGAGGATATAAGGTTTGGCGTGGAAAACGATTTTGATTTTAT
TGCTGCTTCTTTCATTCGCAAAGCCTCTGATGTAAAGGATATAAAGAAGGTTTTGGAGGAGTTTTCCGGCGAAGACATAA
ATGTAATTGCAAAAATTGAGAACAGGGAAGCTATAGAAAACGTTGATGAAATTATAAAAGTAGCTGATGGAATCATGGTA
GCCAGGGGAGATTTGGGGGTTGAAATACCCGTAGAAGAGGTTCCTGTTGTACAGAAAATGCTTATAGAAAAGTGCTACAA
GACGGGTAAGCCGGTTATAACTGCTACTCAAATGCTTGATTCCATGATTAGAAATCCCAGACCTACAAGGGCTGAAGCCA
GTGACATAGCCAATGCCATTTATGACGGTACCAGTGCTATAATGTTGTCGGGTGAAACGGCAGTAGGCAAATATCCTATA
GAAACCCTTGAAACAATGGCAAAGATTGCAAGGAAAGCAGAGGCTTCAATTGATTATTGGGACAGGTTCCAAAAAATGCA
GCATGACTTTTCGCCTAATGTAACCAATGCCATAAGTCATGCCACATGTACAACAGCTCAGGACTTAAAAGCTTCTGCCA
TAATAACGGTAACCCACTCTGGACATACTGCAAGAATGATATCAAGATTCAGACCTCAATGTCCGATAATTGCAACAACG
GTATCACCGAAGGTGCAGCGTCAGTTGTCATTAACCTGGGGAGTTAAGCCTTTCCTTGTTAAGGAAGCTTCATCTACCGA
TGAAATGTTTGATGATGGAGTTGAAAAGGCACTGGAATCTGATCTGGTCAGAAATGGTGACCTGGTTGTAATAACTGCAG
GTTTACCTATTGGAATGAGCGGTACCACCAACATATTAAAGGTTCATCTGGTCGGTAAGGTGCTGGTACAGGGAACCGGA
ATTGGGACAGGAACCGTTACGGGAGAAATAAGAGTTGTAAGGTCGGTTGAAGAGGCCAATGAGAATTTTTCCGACGGAAA
TATATTGGTCGCCCACTATACAACTAATGAAATGCTTCCGATAATTAAAAGAGCATCGGCTTTGGTAATAGAAGAAGGCG
GGCAGAATTCCCATGCAGCCACAGTGGGTATGGCATTGGAAATACCTGTTATAATTGGAGCGGATAATGCCACAAAAATA
CTTAAGAACGGATCGGTAGTGACTGTTGACTCCGACAGGGGAATTGTTTGCTATGGGTCTAATATAAATCAATAG

Protein sequence :
MRKTKIICTLGPAVDNEDILRKLMLKGMDIARLNFSHGTHEEHKIRVDRLKKIREELNLPVALLLDTRGPEIRLGNFEKG
EVVLKEGERFVLVNDDILGDETKCSVSYKELYKDVKKGNRILINDGLVELEVINIKDKDIICEVLNGGTIGNHKGVNVPG
VKVNLPSLTEKDIEDIRFGVENDFDFIAASFIRKASDVKDIKKVLEEFSGEDINVIAKIENREAIENVDEIIKVADGIMV
ARGDLGVEIPVEEVPVVQKMLIEKCYKTGKPVITATQMLDSMIRNPRPTRAEASDIANAIYDGTSAIMLSGETAVGKYPI
ETLETMAKIARKAEASIDYWDRFQKMQHDFSPNVTNAISHATCTTAQDLKASAIITVTHSGHTARMISRFRPQCPIIATT
VSPKVQRQLSLTWGVKPFLVKEASSTDEMFDDGVEKALESDLVRNGDLVVITAGLPIGMSGTTNILKVHLVGKVLVQGTG
IGTGTVTGEIRVVRSVEEANENFSDGNILVAHYTTNEMLPIIKRASALVIEEGGQNSHAATVGMALEIPVIIGADNATKI
LKNGSVVTVDSDRGIVCYGSNINQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-98 48
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-98 48
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-99 48
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-97 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_1090 YP_005045689.1 pyruvate kinase VFG0479 Protein 1e-98 48