Gene Information

Name : Clocl_1015 (Clocl_1015)
Accession : YP_005045616.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1176566 - 1177732 bp
Length : 1167 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence : 
ATGAAGATAGCAATAGCTGGAATAGGATATGTAGGATTATCGAATGCAGTTTTGTTGGCTCAAAACAATGAAGTAATAGC
TATAGATATTGATAGGAAGAAAGTGGATTTGGTAAACAGTAAAAAGTCACCTATTATTGATAATTTAATTGAAGAGTACT
TAGCAACTAAAGATTTAAATCTTGTTGCGACAACAGATAATTTTATGGTTTATAGTGATGCCGATTATGTAATTATTTCA
ACCCCAACCAATTATGATCCTAAAATAAATAGATTTAATACAAGTACAGTGGAAGCTGTAATAAAAAATGTACTTGCAGT
TAACTCTCGGGCAGTAATGGTAATAAGGTCCACTGTACCGGTGGGATATACCAATAGAATCAGGGAAGAGTTTGAAACGG
ATAATATAATTTTCTGCCCTGAGTTTCTCAGAGAAGGAAAAGCACTTTATGACAATCTTTATCCTTCAAGAATAGTAATA
GGTGAGAAGTCTGAAAGAGCAAAACTTTTTGCAGAATTACTGGTGCAAGGGGCAATAAAAAAGGATGTTCCGATTTTACT
TACCGATTCATCGGAAGCGGAAGCTATCAAACTCTTTGCAAATACTTATCTGGCAATGAGAATTGCGTTTTTTAATGAAT
TGGACTCCTTTGCGGAAATCAGAGGTCTTGATACAAAGCAGATTATAGAAGGCGTAGGATTAGATCCGCGAATAGGCCTG
CACTACAACAACCCATCTTTCGGCTACGGCGGATATTGTCTGCCGAAAGATACAAAGCAACTGTTGGCAAACTATGAAAA
CATTCCTCAGAATATAATGTCTGCAATTGTTGAGGCAAATAGAACCAGAAAAGATCATATTGCTGAGATGATCTTAAAGA
GAGAGCCTAAAGTAGTAGGAATTTACAGGCTGACCATGAAAACCGATTCGGATAACTTCAGAGAATCGGCAGTTCAAGGT
ATTATGGAAAGAATTAAACGCAAAGGAGTGGAAGTCGTTGTTTATGAACCTGCATTAAAGGAGGATAAATTCTTACGCTC
AAAGGTTATAAAAGACTTGGATGAATTCAAGGGAATATCGGATGTTATTGTTGCCAACAGACTTTCCGACGAGATTAAAG
ATGTAATGAACAAGGTTTACACCAGAGATTTATTTGGAAGAGACTAA

Protein sequence : 
MKIAIAGIGYVGLSNAVLLAQNNEVIAIDIDRKKVDLVNSKKSPIIDNLIEEYLATKDLNLVATTDNFMVYSDADYVIIS
TPTNYDPKINRFNTSTVEAVIKNVLAVNSRAVMVIRSTVPVGYTNRIREEFETDNIIFCPEFLREGKALYDNLYPSRIVI
GEKSERAKLFAELLVQGAIKKDVPILLTDSSEAEAIKLFANTYLAMRIAFFNELDSFAEIRGLDTKQIIEGVGLDPRIGL
HYNNPSFGYGGYCLPKDTKQLLANYENIPQNIMSAIVEANRTRKDHIAEMILKREPKVVGIYRLTMKTDSDNFRESAVQG
IMERIKRKGVEVVVYEPALKEDKFLRSKVIKDLDEFKGISDVIVANRLSDEIKDVMNKVYTRDLFGRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-93 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocl_1015 YP_005045616.1 nucleotide sugar dehydrogenase VFG0963 Protein 2e-99 55