Gene Information

Name : BYI23_D009480 (BYI23_D009480)
Accession : YP_005043981.1
Strain :
Genome accession: NC_016626
Putative virulence/resistance : Resistance
Product : heavy metal-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1093533 - 1095830 bp
Length : 2298 bp
Strand : -
Note : -

DNA sequence :
ATGCGGCAAGACGCGTGCGGCGAAACCGCGTGCTGCGGCGCGGCCGAACGGCACGAACACGGCGCGCACGATCATCACGG
CCACGATCATTCGCACGATTCGCATGGCCACGAGCACGACCACGGCCACGACCACGGCCACGACGATGCGTGCGGCGGCG
CGGCGCCAGCGTCTTTCGAGGCGCTTGCCGGAACCGTTGCCGTCGGCGCTTCGGTTCGCACCCAGATGCGCATCCTGCAG
ATGGACTGTCCGACCGAGGAAACGCTCATCCGCAAAAAGCTGGGCGGCATGCCGGAAGTCGACGAGCTTGAGTTCAATCT
GATGCAGCGCGTGTTGACGGTGGTGCACCGGCCCGACGGGCTGGATGCCATCGTCAAGGCGCTCGGCACGCTCGGTTTCG
CGCCGGAGCTTGGCGACGCGCCGAAGGCCGCGCCGGAAGTGCGCAAGCCCTGGTGGCCGCTCGCGGTGGCAGTCGTGGCC
GCCGTCGGTTCCGAGGCCGCCAGTTGGGCGGGCGCGCCCGTCTGGGTCGTCGCGGCGCTCGCGCTCGCGGCCGTCGCCTG
CTCGGGGCTCGGCACCTACAAGAAAGGCTGGATCGCCGTTCGGAACCGCAACCTCAACATCAATGCGCTGATGAGCATCG
CCGTGACGGGCGCGCTGCTGCTCGGCCAATGGCCCGAGGCCGCGATGGTGATGGTGCTGTTCACCATCGCCGAACTCATC
GAGGCGAAGTCGCTGGACCGTGCGCGCAATGCCATTCAGGGACTCATGCGCCTCGCCCCCGAAAAGGCCACCGTGAAACA
GGCCGATGGCGCGTGGATCGAGGTCGAAGCGTCGACGATCGCGCCCGGCGCAATCGTGCGCGTCAAGCCGGGCGAGCGGA
TCGGGCTCGACGGGGAGATCGTGAGCGGCCGCTCGACCGTGAATCAGGCGCCGATCACCGGCGAGAGCCTGCCCGTCGAC
AAGGCGGAGGGCGATGCCGTGTTCGCCGGCACCATCAACGAGGCGGGTTCGTTCGAATATCGCGTGACGGCGGCGGCCAA
TAACACGACGCTCGCGCGCATCATCCACGCAGTCGAGGAAGCGCAAGGCGCGAAGGCGCCGACGCAACGCTTCGTCGACC
GGTTCGCGCGCGTCTATACGCCGATCGTTTTCATGCTGGCGGTGGGCGTCGCCGTCATTCCGCCGCTGTTCTTCGCGGGC
GCATGGTTCGACTGGATCTACAAGGCGCTGGTGCTGCTCGTGATCGCCTGCCCGTGTGCGCTGGTGATTTCCACGCCCGT
CACCATTGTCAGCGGCCTCGCCGCCGCGGCGCGTCACGGCATTCTGGTGAAGGGCGGCACGTATCTCGAACAGGGCCGCA
AGCTCGCCTGGCTGGCGCTCGACAAGACCGGCACGATCACACACGGCAAGCCCGTGCAGACCGAATTCGAACTGCGCGCC
GCCGATATCGACAGCGCGACAGTACGCTCGATCGCGGCGAGTCTCGCGGGCCGCTCGGATCATCCGGTTTCGTCCGCAAT
CGCGCGGGCGGCGGCTGCGCAGGGCGTCACCCGGCTGGAAGTCGATGCGTTCGAGGCCATAGCGGGCCGGGGCGTCGCGG
GCGTCGTGAAGGGACGGCGCTACGCGCTCGGCAATCATCGGCTCGTCGAAGAGTCCGGCCGTTGCTCGACCGAGCTCGAA
GCCCGTCTGGATGCGCTGGAGCGCGAGGGCAAGACGGTCGTGATGCTGATCGACCAGACACGCGTGCTCGGCCTCTTCGC
GGTGGCCGATACCGTGAAGGACAGCAGCAAGGACGCCATCGCCGGTCTGCACGCGCTCGGCGTTCGCACGGCGATGCTGA
CCGGCGACAATCCCCACACGGCGGCGGCGATCGCGGCGCAGGTCGGCATCGATCGCGCGGAAGGCAATCAGCTTCCCGAG
GACAAGCTCGCCGTCGTGAAGACGCTATCGAACGGCGGCTCGATGGTGGGCATGGTCGGCGACGGCATCAACGATGCGCC
GGCGCTTGCACAGGCCGATATCGGCTTCGCGATGGGCGCGATGGGAACGGATACCGCCATCGAAACCGCCGACGTCGCGC
TGATGGACGACGACCTGCGCAAGATACCGACGTTCATCCGGCTGTCCAGGGCGACGCACGGCATTCTCGTGCAGAACATC
ACGCTGGCACTGGGGATCAAGGCGGTGTTCCTCGCGTTGACCATCGCCGGTTTGGGCACCATGTGGATGGCCGTGTTCGC
CGATGTCGGCGCGAGTCTGCTGGTCGTCGCCAATGGACTGCGATTGCTTCGGAAGTAG

Protein sequence :
MRQDACGETACCGAAERHEHGAHDHHGHDHSHDSHGHEHDHGHDHGHDDACGGAAPASFEALAGTVAVGASVRTQMRILQ
MDCPTEETLIRKKLGGMPEVDELEFNLMQRVLTVVHRPDGLDAIVKALGTLGFAPELGDAPKAAPEVRKPWWPLAVAVVA
AVGSEAASWAGAPVWVVAALALAAVACSGLGTYKKGWIAVRNRNLNINALMSIAVTGALLLGQWPEAAMVMVLFTIAELI
EAKSLDRARNAIQGLMRLAPEKATVKQADGAWIEVEASTIAPGAIVRVKPGERIGLDGEIVSGRSTVNQAPITGESLPVD
KAEGDAVFAGTINEAGSFEYRVTAAANNTTLARIIHAVEEAQGAKAPTQRFVDRFARVYTPIVFMLAVGVAVIPPLFFAG
AWFDWIYKALVLLVIACPCALVISTPVTIVSGLAAAARHGILVKGGTYLEQGRKLAWLALDKTGTITHGKPVQTEFELRA
ADIDSATVRSIAASLAGRSDHPVSSAIARAAAAQGVTRLEVDAFEAIAGRGVAGVVKGRRYALGNHRLVEESGRCSTELE
ARLDALEREGKTVVMLIDQTRVLGLFAVADTVKDSSKDAIAGLHALGVRTAMLTGDNPHTAAAIAAQVGIDRAEGNQLPE
DKLAVVKTLSNGGSMVGMVGDGINDAPALAQADIGFAMGAMGTDTAIETADVALMDDDLRKIPTFIRLSRATHGILVQNI
TLALGIKAVFLALTIAGLGTMWMAVFADVGASLLVVANGLRLLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 69
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 1e-116 48
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 1e-116 48
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 3e-116 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_D009480 YP_005043981.1 heavy metal-translocating P-type ATPase BAC0298 Protein 0.0 70
BYI23_D009480 YP_005043981.1 heavy metal-translocating P-type ATPase BAC0461 Protein 9e-86 43
BYI23_D009480 YP_005043981.1 heavy metal-translocating P-type ATPase BAC0455 Protein 6e-92 41