Gene Information

Name : sciC (BYI23_D001590)
Accession : YP_005043192.1
Strain :
Genome accession: NC_016626
Putative virulence/resistance : Virulence
Product : putative cytoplasmic protein, sciC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 197609 - 199492 bp
Length : 1884 bp
Strand : -
Note : -

DNA sequence :
ATGGACCCGCGCCTGCTGCGTCACTACAACACCGAGCTTGCCCACCTGCGCGAGATGGGCGCGGAATTCGCCCAGCAGTT
TCCGAAGATCGCGGCGCGGCTCGGCATGAAGGGCATCGACGTGGCCGACCCCTATGTCGAGCGGCTGCTCGAAGGCACGG
CGTTCCTGGCCGCACGCGTTCAACTGAAGCTCGAAGAAGAGTTTCCGCGTTTCACGCAGCAACTCGCGCACGTCGTGCTG
CCGCAGGCCGGATGTCCGACGCCCGCGATGCTGATCGCGCGTCTCGCGCCCGATCTCGCCAATCCGAATCTCGCCGATGG
CTTCACCGTGCCGCGTCACACCGCGCTGCTTTCCACGCGCGCGCCCGCCGACACGACACCGTGCGAATTCCGCACGGCCG
CGGCGCTCACGCTCTGGCCCGTCGAGCTCACCGACGCGCGCTATCTCGCGCAGCTTCCGGACCTGCCGCTCGCCGCGCTG
CCCGCGACGCGCCCGCTCGCGCATCGCGTGAAAGGCGCGGTGCGCATCAGGCTCGCGACGCCGGAGGGCCTCTCGTTCGA
CGCCTTGCGTCTCGATGCGCTCTCGCTCTACTTCGCGGGCGGCGACGACACCGCGTACCGGCTCGCCGAACGCGTGCTCG
GCGGCACGCTCGCGATCGTCGTATCGACGCCCGAGCGCCCGAGCCGCGCGCTCGCCGTGCTGCCCGGCGACGCCGTCTCG
CTGCCGGGTTTCGACGCGGACGAAGCGCTCCTGCCGGTCACGCCGAACGCGTTCCAGGGCTATCGCGTGCTGCACGAGTA
TTTCGCGCTGCCCGAGCGCTTTCGCTTCGCCCGCATCGAAGGGATCGCGAGCGTGCTGCGCGCCTTTCCCGTGCGCGAAA
TCGAGCTTACGTTCCTGCTCGCGGCGGGTGACCCACCGCTTGAACGCATCGTCACGAAGGATCACGTGCTGCTGCACTGC
GTGCCCGCCGTCAATCTCTTCCCGAAGCAGGCGAACCCCGCGCTCGTCACCGACGCCGCCGCGCGCTTTCATGTGATTCC
CGACCGCACGCATCCGCTCGATTACGAAGTGCATTCGGTTACGGGCGTGACCGGCTACGGCGCGAGCGACGACAGCGAGC
AGGCGTTCCATCCGTTCTATGCGGACTATCTCGCGGACCGGCCCGGCGAGGCCGCGTACTTCACCGTCGAGCGCGAGCCG
CGCCTCGTGCCCGCCGCGCGGAAAAAGAGCGGCGCGCGCACCGACTACGTCGGCAGCGAAATGTATGTATCGATCGTCGA
TCCGCGCGCCGCGCCGTATCGCGGCGCCTTGCGGCAACTGTCGTTCGCCACGCTGTGCAGCAACCGCGATTTGCCGCTGA
TGCTTACGCCAGGCGGCGCGGGCAGCGACTTCTCGCTCGACATCGCCGCGCCCGTCGCCGCCGTGCACTGCGTGAGCGGC
CCGTCGCGGCCCGCGCCCGCGACGCTCGACGGCGCGCAAACCTGGCGTCTCATCGATCAGCTATCGCTGCACTATCTGTC
GCTGTGCAACGGCCCGCGCGAGGCCGCGGCGGCGCTGCGCGCGCTCCTGATGCTGCATGTCGCGCCCCACGACGGCGCGG
GCCGCGGCCAGGTCGCGGGCGTCGTATCCGTCGATGCGAAGCCCGTCGTGCGACGTTTGCCGATGCCCGGCCCGATCGCC
TTCGGGCGCGGCCTGTCGATCGACGTGCTGGTCGACGAACTCGCGTTTCAGGGCGGCAGCGCCTGGCTTTTCGGCTGCGT
GCTCGATCGCTTTTTCGCGCGTTACGTGTCGATCAATTCGTTCGTGCAGACGACGCTGCGCACCGACGCGCGCGGCGAAA
TCCTGCGCTCGCGCACGCGATGCGGCACGCGAGCGATTTTCTAG

Protein sequence :
MDPRLLRHYNTELAHLREMGAEFAQQFPKIAARLGMKGIDVADPYVERLLEGTAFLAARVQLKLEEEFPRFTQQLAHVVL
PQAGCPTPAMLIARLAPDLANPNLADGFTVPRHTALLSTRAPADTTPCEFRTAAALTLWPVELTDARYLAQLPDLPLAAL
PATRPLAHRVKGAVRIRLATPEGLSFDALRLDALSLYFAGGDDTAYRLAERVLGGTLAIVVSTPERPSRALAVLPGDAVS
LPGFDADEALLPVTPNAFQGYRVLHEYFALPERFRFARIEGIASVLRAFPVREIELTFLLAAGDPPLERIVTKDHVLLHC
VPAVNLFPKQANPALVTDAAARFHVIPDRTHPLDYEVHSVTGVTGYGASDDSEQAFHPFYADYLADRPGEAAYFTVEREP
RLVPAARKKSGARTDYVGSEMYVSIVDPRAAPYRGALRQLSFATLCSNRDLPLMLTPGGAGSDFSLDIAAPVAAVHCVSG
PSRPAPATLDGAQTWRLIDQLSLHYLSLCNGPREAAAALRALLMLHVAPHDGAGRGQVAGVVSVDAKPVVRRLPMPGPIA
FGRGLSIDVLVDELAFQGGSAWLFGCVLDRFFARYVSINSFVQTTLRTDARGEILRSRTRCGTRAIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 5e-98 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sciC YP_005043192.1 putative cytoplasmic protein, sciC VFG2074 Protein 1e-137 49